Alignparse

Latest version: v0.6.3

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0.6.3

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Fixed
+++++
* Fix bug in handling ``minimap2`` errors ([see this issue](https://github.com/jbloomlab/alignparse/issues/99))
* Pass formatting with new ``black`` version
* Pass tests with new ``pandas`` version.
* Fixed ``simple_mut_consensus`` for newer versions of ``pandas`` when goruping by just one variable.

Changed
+++++++
* Change code linting to ``ruff`` rather than ``flake8``.
* Test with GitHub Actions rather than Travis CI.
* Remove ``mybinder`` examples.
* Test on Python 3.11 rather than 3.9.
* Don't allow ``pysam`` version 0.22.1 as it was causing some type of OPENSSL import error.
* Test with ``minimap2`` version 2.22

0.6.2

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Fixed
+++++
* Require python 3.8 or greater.

0.6.1

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Fixed
+++++
* Pass tests on newer dependency versions, test on python 3.9.

0.6.0

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Added
+++++
* Can parse reports from ``pbccs`` version 6.0.

0.5.0

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Added
+++++
* ``MutationRenumber`` accepts parameter ``allow_letter_suffixed_numbers`` to allow sites with lowercase letter suffixes (e.g, ``214a``)

0.4.1

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Fixed
+++++
* Remove deprecated ``pandas.DataFrame.append``

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