Autogaita

Latest version: v0.4.1

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0.4.1

- Fixed an **important bug** in dlc where Angle velocities & accelerations were computed twice which translated to group’s feature window
- Fixed issue in dlc where angular velocities/accel. wouldn’t have been computed if primary joints were empty
- Fixed an issue with group gaita GUI where results-dir-check depended on Average (and not Normalised) Stepcycle.xls (couldn’t work on example data in repo!)

0.4.0

- **Major rework of all three GUIs**
- **Note that for now updates to first-level analyses are only provided to the dlc and not the simi toolbox due to low demand.**
- Might change in the future. Results of autogaita_simi are still analysable with autogaita_group.
- Sanity checking user’s anova_design cfg & informing users about which IDs are included in RM ANOVAs.
- Ignoring warnings of pandas2.2.2. deprecated dtypes. Fixing once all tests are implemented to be sure fixes don’t break stuff.
- Users do not need to worry about the decimal precision in their annotation tables (Laura Shoenhals’ contribution)
- DLC: x coordinates can now be standardised to a standardisation (baseline) joint
- Automatically generates XLS files with and without standardisation (also if autogaita_group is run)
- Step-cycle-level plots are based on non-standardised x-coord.s and average-level plots are based on standardised x-coord.s
- DLC: y coordinates can now be standardised to a standardisation (baseline) joint
- Fixed that simi assumed units to be in metres in plots
- Fixed that simi broke if only one leg had no valid step cycles
- Fixed an issue that did not plot y-axis labels of stats-plots if features were velocities or accelerations
- Added cfg entries:
- dlc: standardise_x_coordinates, x_standardisation_joint, standardise_y_to_a_joint, y_standardisation_joint

0.3.1

- Closing all figures using plt.close("all")
- Critical bugfix of simi w.r.t. analyse_average_y implementation

This version's documentation [is archived here!](https://docs.google.com/document/d/11mJd7jUHk7joQ0BdZT98CJRrIANdyosMQMJGFtp6yR4/edit?usp=sharing)

0.3.0

- Implemented Luca's "AutoGaitA Figure Panel"
- With some minor bugfixes & aesthetical improvements
- Horizontal coordinates (x in DLC/Y in Simi) are now “analysed”, not just exported - i.e. we plot figures of them if True
- Fixed issue in group that did not include horizontal coord in XLS sheetfiles and dfs and thus would throw error if user tried to test those statistically.
- *Note that this feature has so far only been tested with locomotion analyses*
- Documenting changes in cfg dicts here too now
- Added cfg entries in this version:
- dlc: analyse_average_x
- simi: analyse_average_y
- group: dont_show_plots

0.2.2

- Fixed that Tukeys would sometimes not run because interaction effect’s GG-corr p was nan
- Fixed a small os.path.join() statement when group gaita tried to load config files

0.2.1

- Fixed autogaita_dlc's file naming convention requiring a leading underscore and hyphen in [C] and [E].

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