Bgcflow-wrapper

Latest version: v0.4.0

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0.4.0

- Upgrade Snakemake to v8.14.0
- **Fix**: Improve `get-result` command to be more intuitive
- **Docs**: Update citation
- [Full Changelog](https://github.com/NBChub/bgcflow_wrapper/compare/v0.3.5...v0.4.0)

0.3.5

- Snakemake fix and security update by matinnuhamunada in https://github.com/NBChub/bgcflow_wrapper/pull/39
- **Fix**: Pin pulp version to 2.7.0 to address snakemake dependency issue: https://github.com/snakemake/snakemake/issues/2606
- **Feat**: add `--profile` parameters on `bgcflow` run to use snakemake profiles
- **Chore(deps)**: bump pip from 22.3.1 to 23.3 by dependabot in https://github.com/NBChub/bgcflow_wrapper/pull/40
- [Full Changelog](https://github.com/NBChub/bgcflow_wrapper/compare/v0.3.4...v0.3.5)

0.3.4

Not secure
- Synchronize with BGCFlow version 0.7.9
- **Feat**: add CLI option for lsabgc and ppanggolin by matinnuhamunada in [PR 37](https://github.com/NBChub/bgcflow_wrapper/pull/37)
- **Chore**: Auto detect available CPU
- **Feat**: give option to turn off panoptes
- [Full Changelog](https://github.com/NBChub/bgcflow_wrapper/compare/v0.3.3...v0.3.4)

0.3.3

Not secure
- **Fix**: Pin snakemake to v7.31.1 for compatibility with panoptes-ui job monitoring. [PR 35](https://github.com/NBChub/bgcflow_wrapper/pull/35)
- **Chore**: Security updates. [PR 35](https://github.com/NBChub/bgcflow_wrapper/pull/35)
- [Full Changelog](https://github.com/NBChub/bgcflow_wrapper/compare/v0.3.2...v0.3.3)

0.3.2

Not secure
- Release package in [PyPi](https://pypi.org/project/bgcflow_wrapper)
- **Change**: Downgrade pandas. [PR 29](https://github.com/NBChub/bgcflow_wrapper/pull/29)
- **Chore**: Dependency updates including urllib3 and cryptography. [PR 31](https://github.com/NBChub/bgcflow_wrapper/pull/31), [PR #30](https://github.com/NBChub/bgcflow_wrapper/pull/30)
- **New Contributor**: dependabot. [PR 31](https://github.com/NBChub/bgcflow_wrapper/pull/31)
- [Full Changelog](https://github.com/NBChub/bgcflow_wrapper/compare/v0.3.1...v0.3.2)

0.3.1

- **Update**: Read project metadata for dbt models synchronization. Manual definition of dbt models to exclude also added.
- [Full Changelog](https://github.com/NBChub/bgcflow_wrapper/compare/v0.3.0...v0.3.1)

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