Bioregistry

Commits
- fbfe6f5: Bump version: 0.12.6 → 0.12.7-dev (Charles Tapley Hoyt)
- 26613b2: 🫀Health Report (GitHub Action)
- 1ed2e50: Update error messages for references (1482) (Charles Tapley Hoyt) [1482](https://github.com/biopragmatics/bioregistry/pull/1482)
- 5d59169: Bump version: 0.12.7-dev → 0.12.7 (Charles Tapley Hoyt)

Commits
- cc53525: Bump version: 0.12.5 → 0.12.6-dev (GitHub Action)
- cd1b3e1: Add strict flag to normalize_prefix (1481) (Charles Tapley Hoyt) [1481](https://github.com/biopragmatics/bioregistry/pull/1481)
- f92dcae: Bump version: 0.12.6-dev → 0.12.6 (Charles Tapley Hoyt)

Commits
- 0c7a01b: Bump version: 0.12.2 → 0.12.3-dev (GitHub Action)
- 0f1af8c: Update predictions file with papers between 2025-02-01 and 2025-02-28 (github-actions[bot])
- 2f8de62: 🫀Health Report (GitHub Action)
- bc13cb8: Embeddings-based automated checking of mappings for correctness (1439) (Benjamin M. Gyori) [1439](https://github.com/biopragmatics/bioregistry/pull/1439)
- 087bba5: Remove incorrect HP mappings (1434) (Benjamin M. Gyori) [1434](https://github.com/biopragmatics/bioregistry/pull/1434)
- 8b8560b: Ruff/mypy cleanup (1442) (Charles Tapley Hoyt) [1442](https://github.com/biopragmatics/bioregistry/pull/1442)
- 55ee9f7: Bump version: 0.12.3-dev → 0.12.3 (Charles Tapley Hoyt)

Commits
- 1c69c14: Bump version: 0.11.35 → 0.11.36-dev (Charles Tapley Hoyt)
- dc651ee: Add explicit contact and attribution policy (Charles Tapley Hoyt)
- 39ba3f9: Add prefix: eubopen (1378) (Nalika Palayoor) [1378](https://github.com/biopragmatics/bioregistry/pull/1378)
- fa48931: Add prefix: deims (1382) (github-actions[bot]) [1382](https://github.com/biopragmatics/bioregistry/pull/1382)
- 57ab5ad: Generate JSON schema with Pydantic 2 (1210) (Charles Tapley Hoyt) [1210](https://github.com/biopragmatics/bioregistry/pull/1210)
- b5b8274: Apply black 2025 formatting (1390) (Charles Tapley Hoyt) [1390](https://github.com/biopragmatics/bioregistry/pull/1390)
- fedaae7: Require Pydantic 2 (1391) (Charles Tapley Hoyt) [1391](https://github.com/biopragmatics/bioregistry/pull/1391)
- f0a1f0f: Start applying ruff (1371) (Charles Tapley Hoyt) [1371](https://github.com/biopragmatics/bioregistry/pull/1371)
- e315071: Update predictions file with papers between 2025-01-02 and 2025-02-01 (github-actions[bot])
- 177d904: Override URI format for SIO (1395) (Benjamin M. Gyori) [1395](https://github.com/biopragmatics/bioregistry/pull/1395)
- 9be5cd2: 🫀Health Report (GitHub Action)
- ace8b61: Update ECCODE pattern to allow optional dashes (1396) (Benjamin M. Gyori) [1396](https://github.com/biopragmatics/bioregistry/pull/1396)
- e83e2f4: Adjust the dates for paper_ranking pipeline to be from the first to the last of the previous month (1402) (Mufaddal Naguthanawala) [1402](https://github.com/biopragmatics/bioregistry/pull/1402)
- 89221aa: Add prefix: mibig (1408) (github-actions[bot]) [1408](https://github.com/biopragmatics/bioregistry/pull/1408)
- a1283c3: New prefix: mirgenedb (1393) (Nalika Palayoor) [1393](https://github.com/biopragmatics/bioregistry/pull/1393)
- 3b9f87d: Update curated_papers.tsv with irrelevant curations (1380) (Nalika Palayoor) [1380](https://github.com/biopragmatics/bioregistry/pull/1380)
- cf18218: 🫀Health Report (GitHub Action)
- 60c44c3: Fixing GO entries (1411) (Chris Mungall) [1411](https://github.com/biopragmatics/bioregistry/pull/1411)
- c0f9641: New schema field - contact page (1392) (Charles Tapley Hoyt) [1392](https://github.com/biopragmatics/bioregistry/pull/1392)
- 7fae7ba: Rename clingene to clingen.allele (1412) (Mufaddal Naguthanawala) [1412](https://github.com/biopragmatics/bioregistry/pull/1412)
- 7005a15: Update URI formats for tair.locus and tair.protein (1386) (Benjamin M. Gyori) [1386](https://github.com/biopragmatics/bioregistry/pull/1386)
- 7b35140: New publication: rgd (1399) (Nalika Palayoor) [1399](https://github.com/biopragmatics/bioregistry/pull/1399)
- ba174d0: New prefix: psskb (1398) (Nalika Palayoor) [1398](https://github.com/biopragmatics/bioregistry/pull/1398)
- 6fdc2c6: Rename eccode to ec (1413) (Mufaddal Naguthanawala) [1413](https://github.com/biopragmatics/bioregistry/pull/1413)
- 8436c96: New prefix: holofood (1400) (Nalika Palayoor) [1400](https://github.com/biopragmatics/bioregistry/pull/1400)
- c32768c: Update curated_papers.tsv with irrelevant curations (1401) (Nalika Palayoor) [1401](https://github.com/biopragmatics/bioregistry/pull/1401)
- 9fa6bdf: New schema field - secondary contact list (1388) (Charles Tapley Hoyt) [1388](https://github.com/biopragmatics/bioregistry/pull/1388)
- d97de9a: New schema field - group email (1389) (Charles Tapley Hoyt) [1389](https://github.com/biopragmatics/bioregistry/pull/1389)
- 8f33ba9: New schema element: secondary reviewers (1415) (Charles Tapley Hoyt) [1415](https://github.com/biopragmatics/bioregistry/pull/1415)
- 79f405f: Add prefix: mite (1406) (github-actions[bot]) [1406](https://github.com/biopragmatics/bioregistry/pull/1406)
- 38f25fe: Show provenance for annotations in web app (1095) (Charles Tapley Hoyt) [1095](https://github.com/biopragmatics/bioregistry/pull/1095)
- 04515e8: Bump version: 0.12.0-dev → 0.12.0 (Charles Tapley Hoyt)

Commits
- ffd5863: Bump version: 0.11.34 → 0.11.35-dev (GitHub Action)
- 32b809f: Update prefix: seed --> seed.subsystem (1365) (Nalika Palayoor) [1365](https://github.com/biopragmatics/bioregistry/pull/1365)
- f70ffa6: Update curated_papers.tsv with irrelevant curations (1364) (Nalika Palayoor) [1364](https://github.com/biopragmatics/bioregistry/pull/1364)
- e591cfc: 🫀Health Report (GitHub Action)
- 3bd2d2b: New prefix: PharmGKB Variant (1368) (Charles Tapley Hoyt) [1368](https://github.com/biopragmatics/bioregistry/pull/1368)
- bfee1d4: Commit Predictions File with Git Hash Link, Remove Artifact Upload (1350) (Mufaddal Naguthanawala) [1350](https://github.com/biopragmatics/bioregistry/pull/1350)
- fccbfae: Search PubMed Papers In Specific Date Range for Paper Ranking Workflow (1367) (Mufaddal Naguthanawala) [1367](https://github.com/biopragmatics/bioregistry/pull/1367)
- 2e7bcab: Add test for duplicate PubMed in literature curation sheet (1369) (Charles Tapley Hoyt) [1369](https://github.com/biopragmatics/bioregistry/pull/1369)
- d1d8c00: Avoid returning windows-style line returns (1370) (Charles Tapley Hoyt) [1370](https://github.com/biopragmatics/bioregistry/pull/1370)
- a97db54: Lint (Charles Tapley Hoyt)
- 36cad81: Add prefix: seed.role (1341) (github-actions[bot]) [1341](https://github.com/biopragmatics/bioregistry/pull/1341)
- 5439c7a: New prefix: NORD (1375) (Charles Tapley Hoyt) [1375](https://github.com/biopragmatics/bioregistry/pull/1375)
- 8bd8b65: Add prefix: dome (1374) (Nalika Palayoor) [1374](https://github.com/biopragmatics/bioregistry/pull/1374)
- da38028: Update curated_papers.tsv with irrelevant curations (1372) (Nalika Palayoor) [1372](https://github.com/biopragmatics/bioregistry/pull/1372)
- 4a4d972: Update curated_papers.tsv with irrelevant curations (1377) (Nalika Palayoor) [1377](https://github.com/biopragmatics/bioregistry/pull/1377)
- de94940: Add data integrity check for bad emails and malformed repositories (1379) (Charles Tapley Hoyt) [1379](https://github.com/biopragmatics/bioregistry/pull/1379)
- 335528b: 🫀Health Report (GitHub Action)
- aabc683: Update New Prefix Workflow to Process Specific Issue (1376) (Mufaddal Naguthanawala) [1376](https://github.com/biopragmatics/bioregistry/pull/1376)
- 1a53a3c: Add OWL download for uniprot.core (Charles Tapley Hoyt)
- d6c41f4: Add note about prefix pluralization to contribution guidelines (Charles Tapley Hoyt)
- 0c87a55: Add prefix: silva (1307) (github-actions[bot]) [1307](https://github.com/biopragmatics/bioregistry/pull/1307)
- c7ad37f: Bump version: 0.11.35-dev → 0.11.35 (Charles Tapley Hoyt)

Commits
- ffa3211: Bump version: 0.11.22 → 0.11.23-dev (GitHub Action)
- 6374569: Add prefix: gtdb (1242) (Benjamin M. Gyori) [1242](https://github.com/biopragmatics/bioregistry/pull/1242)
- f2ccb57: Add missing gtdb license (Charles Tapley Hoyt)
- d9a9df5: Add prefix: dpvocab (1240) (github-actions[bot]) [1240](https://github.com/biopragmatics/bioregistry/pull/1240)
- 84581d5: Add new provider for `hgnc.symbol`: `cbgda` (1225) (Mufaddal Naguthanawala) [1225](https://github.com/biopragmatics/bioregistry/pull/1225)
- bca56b1: Remove incorrect fairsharing mapping from `seed` (1245) (Charles Tapley Hoyt) [1245](https://github.com/biopragmatics/bioregistry/pull/1245)
- 2fac64e: 🫀Health Report (GitHub Action)
- 15bc130: New prefix: humap (1249) (Charles Tapley Hoyt) [1249](https://github.com/biopragmatics/bioregistry/pull/1249)
- 75be565: Update dpvocab license info (1250) (Arthit Suriyawongkul) [1250](https://github.com/biopragmatics/bioregistry/pull/1250)
- 9573b48: Data updates for obo-db-ingest (1252) (Charles Tapley Hoyt) [1252](https://github.com/biopragmatics/bioregistry/pull/1252)
- 400a417: Bump version: 0.11.23-dev → 0.11.23 (Charles Tapley Hoyt)