Bubblegun

Latest version: v1.1.8

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1.1.0

This new release now works with overlap graphs and de Bruijn graphs, so it only takes the GFA file as input and no more k value. Also, doesn't use recursion for finding bubble chains which was taking too much memory and breaking for big graphs.

Was minimally tested and seems to work, still needs more thorough testing

1.0.1

BFS and Chainout were fixed in this minor update after the JSON output was updated.

After unpacking, should be easily installed using `python3 setup.py install` or to install for a user without having admin access (e.g. on a server) `python3 setup.py install --user`
The binary `BubbleGun` should be available in `~/./local/bin` and can be called from the terminal with `BubbleGun`

1.0.0

This is the first release of BubbleGun. So far been tested by several users and working.
After unpacking, should be easily installed using `python3 setup.py install` or to install for a user without having admin access (e.g. on a server) `python3 setup.py install --user`
The binary `BubbleGun` should be available then in `~/./local/bin` and can be called from terminal with `BubbleGun`

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