Cellmaps-utils

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* Add ``compute_hierarchy_robustness`` method to ``HierarchyDiff`` class to assess the robustness of a hierarchy
based on Jaccard similarity across multiple alternative hierarchies.

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* Add ``HierarchyDiff`` class with ``compare_hierarchies`` method to compare two hierarchies in CX2 format, and output
a hierarchy with robustness score of each system.

* Add version bounds for required packages.

* Add ``convert_hierarchical_network_to_hcx`` (utility function that aids convertion of a hierarchical network in CX2 to
HCX) and ``add_hcx_members_annotation`` (adds 'HCX::members' attribute to nodes) to ``hcx_utils``

* Fixes in IF and APMS tools

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* Add ``HiDeFToHierarchyConverter``, a class to convert a edge list and node list
in HiDeF format to hierarchy in HCX.
* Add ``InteractomeToDDOTConverter`` and ``DDOTToInteractomeConverter``, classes to convert network in
CX2 format to DDOT format and vice versa, ``HierarchyToDDOTConverter`` and ``DDOTToHierarchyConverter``,
classes to convert hierarchy network in HCX format to DDOT and vice versa.

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* Updated provenance utils, added checks in for missing data in input RO-Crate,
and allowing to continue but logging errors in the process

* Add ``HierarchyToHiDeFConverter``, a class to convert a hierarchy network
(in CX2 format) to a HiDeF format nodes and edges lists.

* Add ``NDExHierarchyUploader``, a class for uploading hierarchy and
its parent network to NDEx.

* Updated ``cellmaps_utilscmd.py`` ``apmsconverter``, ``ifconverter``,
``crisprconverter`` to support tissue as well as output
``data_info.json`` file to resulting RO-Crate so subsequent tools can
more easily get provenance information


* Updated ``cellmaps_utilscmd.py crisprconverter`` to consume ``.h5ad``
files and updated readme.txt file

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* Bumped fairscape-cli dependency to ``0.2.0``

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* Bumped fairscape-cli dependency to ``0.1.14`` to support schemas

* Added support for ``schema`` to **data_dict** parameter in ``ProvenanceUtil.register_dataset()``

* Added ``--release`` flag to ``cellmaps_utilscmd.py rocratetable`` and
in output table renamed "Name of Computation" to "Name" as well as
added "Type", "Cell Line", "Treatment", "Gene set", and "Version" to
table output

* Set default logging level to ``ERROR`` for ``cellmaps_utilscmd.py`` command