Clinker

**Full Changelog**: https://github.com/gamcil/clinker/compare/v0.0.28...v0.0.29

* Add uppercase ID to list of gene identifiers (fixes 110)

**Full Changelog**: https://github.com/gamcil/clinker/compare/v0.0.30...v0.0.31

* Fix bug in logger statement when shifting origin
* Check for undefined sequence when parsing input files (requires BioPython >=1.80)

What's Changed
* ✨ feat: enhancement 113 by Aurorabili in https://github.com/gamcil/clinker/pull/114

New Contributors
* Aurorabili made their first contribution in https://github.com/gamcil/clinker/pull/114

**Full Changelog**: https://github.com/gamcil/clinker/compare/v0.0.29...v0.0.30

* Added colour map argument when specifying groups

* Explicitly check for BioPython version when splitting Alignment/PairwiseAlignment objects instead of try/except

* Fixed an issue with parsing pairwise alignments after changes to default printed format in BioPython v1.80 (https://github.com/biopython/biopython/issues/4183). Should now work fine pre/post v1.80. (https://github.com/gamcil/clinker/issues/91)