Custardpy

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2.2.0

- Added [FitHiChIP](https://ay-lab.github.io/FitHiChIP/html/index.html)

2.1.2

- Fixed a bug where `run_3DChromatin_ReplicateQC.sh` gave a "No such file or directory" error.

2.1.1

- Modified `convert_JuicerDump_to_dense.py` in **CustardPy** to fix a future warning message.

2.1.0

- Fixed a bug where ``juicer_map.sh`` failed when passing "\_" for ``fastq_post`` valuable and there were underscores (\_) in the FASTQ directory name.

2.0.1

- Added `libgit2-dev` to install `gert` in R
- Added a message in ``juicer_pigz.sh`` and ``juicer_unpigz.sh``

2.0.0

- Changed Python environment from conda to micromamba (`/opt/micromamba`)
- Updated Python from 3.8.17 to 3.10.13
- Install [HiCLift](https://github.com/XiaoTaoWang/HiCLift)

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