Duplex-tools

Latest version: v0.3.3

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0.3.3

Added
- Deprecation warning. Update sam->bam in readme.

0.3.2

Added
- Update to `dorado_stereo.sh`, do not create directories when using -n flag (dry run).

0.3.1

Added
- wrapper for a prototype stereo-calling pipeline `dorado_stereo.sh` that does 2-stage stereo calling.

0.3.0

Changed
- update fastx iteration in `split_pairs` to be compatible with pyfastx>=0.9.0.
Fixed
- Bug where `split_pairs` would raise a StopIteration if dataset has < 5k reads.

0.2.20

Added
- `split_pairs`, a tool to recover non-split reads into their template/complement parts.

0.2.19

Fixed
- Bug where approximate start times led to incorrectly rejecting candidate duplex pairs.

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