Fuchs

We are happy to release the new maintenance version 0.3.1 of FUCHS as of today.


Fixes:
- Two division by zero errors have been fixed (219047b5d1e6dfa64fba25f6d7ee315ec6964f22, c2f36ad402606293e21ff12106ac40674a3b6c3a)
- Version lock of numpy was removed (afe71920b382c9ad90c37db71090e5198a600cb4)

We are happy to release the new major version 0.3.0 of FUCHS as of today.

Major changes:
- FUCHS 0.3.0 now requires Python 3.5 and will NOT work anymore with Python 2.x.

Fixes:
- Default CPU/thread count is now 4 https://github.com/dieterich-lab/FUCHS/commit/a0d851f9cedfff0b527814d9723999ebd90b271a
- Default temporary directory is now `/tmp/` https://github.com/dieterich-lab/FUCHS/commit/0f3001a8dd92452a78f7196f78775be354fb3283
- Default output format is now `PDF`, not `PNG`
- Fix for non-unique chimeric alignments https://github.com/dieterich-lab/FUCHS/commit/e15e09a5cbf8e158f256ae28409896b32c8ebc72
- Division by 0 error https://github.com/dieterich-lab/FUCHS/commit/8dfe1deda432bac9f0f089eef6a433dd1ba5d469, https://github.com/dieterich-lab/FUCHS/commit/158d705fb7d586e8fa2066b3020110354f52591a
- Multiple visualization fixes https://github.com/dieterich-lab/FUCHS/commit/320090d6a6fba81f1bc903e8c1ebc4a7c86e3fd4, https://github.com/dieterich-lab/FUCHS/commit/210e27293c322598211bce77ff5aa9c191083a91, https://github.com/dieterich-lab/FUCHS/commit/0a43df922bcc5d466fdd4c2872b675fd556cb28f, https://github.com/dieterich-lab/FUCHS/commit/d0d353272203f75a31c17a1aa7f479d0d16546fc
- Updating `setup.py` and package dependencies

We are happy to announce version 0.2.0 of FUCHS which enables parallelism thought the tool and allows for much shorter processing times. We also included fixes for problematic BED files that otherwise would force FUCHS to crash.

We are happy to release the first version of FUCHS: v0.1.0.
FUCHS enables you to obtain more information about your detected circRNAs, i.e inner exon-intron structure and read coverage profile.

We are grateful for any comments, bug-reports and user suggestions via the [issue interface](https://github.com/dieterich-lab/FUCHS/issues/new)