Ga4gh.vrs

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2.0.0a7

What's Changed
* build: configure build with pyproject.toml by jsstevenson in https://github.com/ga4gh/vrs-python/pull/388
* docs: updates to vcf_annotator.md by wesleygoar in https://github.com/ga4gh/vrs-python/pull/385
* feat: update gks-common/vrs model by korikuzma in https://github.com/ga4gh/vrs-python/pull/391
* fix: get `make test` to run by korikuzma in https://github.com/ga4gh/vrs-python/pull/396
* build: update supported python versions by korikuzma in https://github.com/ga4gh/vrs-python/pull/399
* refactor: use Annotated with StringConstraints instead of constr by korikuzma in https://github.com/ga4gh/vrs-python/pull/394
* Only attempt to create allele if values were extracted by ehclark in https://github.com/ga4gh/vrs-python/pull/401
* Adding the getting_started notebooks and removing the rest. by toneillbroad in https://github.com/ga4gh/vrs-python/pull/402
* fix: add password to docker-compose.yml for uta service by korikuzma in https://github.com/ga4gh/vrs-python/pull/405
* docs: update readme (install seqrepo, psql cmd, + submodules) by korikuzma in https://github.com/ga4gh/vrs-python/pull/406


**Full Changelog**: https://github.com/ga4gh/vrs-python/compare/2.0.0-a6...2.0.0-a7

2.0.0a6

What's Changed
* Test enref / deref behavior by ahwagner in https://github.com/ga4gh/vrs-python/pull/357
* docs: update docstring for VrsObjectIdentifierIs by korikuzma in https://github.com/ga4gh/vrs-python/pull/355
* simplify normalization implementation by ahwagner in https://github.com/ga4gh/vrs-python/pull/358
* feat!: parameterize normalize in translator by korikuzma in https://github.com/ga4gh/vrs-python/pull/361
* Add support for mito `m.` in translate_from by larrybabb in https://github.com/ga4gh/vrs-python/pull/362
* chore: remove submodules from package data by korikuzma in https://github.com/ga4gh/vrs-python/pull/371
* chore: move VariationNormalizerRESTDataProxy to notebooks by korikuzma in https://github.com/ga4gh/vrs-python/pull/374
* feat: refactor hgvsTools and support `c.` translation by larrybabb in https://github.com/ga4gh/vrs-python/pull/366
* chore: remove unused code by korikuzma in https://github.com/ga4gh/vrs-python/pull/373
* refactor: simplify validating reference sequence by korikuzma in https://github.com/ga4gh/vrs-python/pull/375
* docs: update + reorganize readme by korikuzma in https://github.com/ga4gh/vrs-python/pull/376
* chore!: remove localizer by korikuzma in https://github.com/ga4gh/vrs-python/pull/379
* cicd: fix release when multiple branches track same tag by korikuzma in https://github.com/ga4gh/vrs-python/pull/384
* feat: add inclusion of "NT" prefixed refseq accessions to hgvs tools by larrybabb in https://github.com/ga4gh/vrs-python/pull/383

New Contributors
* larrybabb made their first contribution in https://github.com/ga4gh/vrs-python/pull/362

**Full Changelog**: https://github.com/ga4gh/vrs-python/compare/2.0.0-a5...2.0.0-a6

2.0.0a5

What's Changed
* Restore repeat subunit length re-computation for normalization by ehclark in https://github.com/ga4gh/vrs-python/pull/352
* Issue 351.2 by ahwagner in https://github.com/ga4gh/vrs-python/pull/353


**Full Changelog**: https://github.com/ga4gh/vrs-python/compare/2.0.0-a4...2.0.0-a5

2.0.0a4

What's Changed
* computed identifiers using pydantic model serializers by ahwagner in https://github.com/ga4gh/vrs-python/pull/342


**Full Changelog**: https://github.com/ga4gh/vrs-python/compare/2.0.0-a3...2.0.0-a4

2.0.0a3

What's Changed
* cicd: delete stale action by korikuzma in https://github.com/ga4gh/vrs-python/pull/316
* cicd: update branch name for release by korikuzma in https://github.com/ga4gh/vrs-python/pull/319
* chore: update submodules by korikuzma in https://github.com/ga4gh/vrs-python/pull/320
* docs: update uta docker image in readme by korikuzma in https://github.com/ga4gh/vrs-python/pull/323
* docs: change order in readme (294) by korikuzma in https://github.com/ga4gh/vrs-python/pull/321
* feat: add intro to terra notebook by korikuzma in https://github.com/ga4gh/vrs-python/pull/318
* docs: include more information on postgresql in readme by korikuzma in https://github.com/ga4gh/vrs-python/pull/322
* docs: update vrs-python and vrs version correspondences by korikuzma in https://github.com/ga4gh/vrs-python/pull/324
* docs: update default branches for VRS-Python / VRS by korikuzma in https://github.com/ga4gh/vrs-python/pull/326
* chore: remove unused files by jsstevenson in https://github.com/ga4gh/vrs-python/pull/329
* fix: use start/end constraints for `digest` and `refgetAccession` fields by jsstevenson in https://github.com/ga4gh/vrs-python/pull/328
* cicd: remove tox by jsstevenson in https://github.com/ga4gh/vrs-python/pull/331
* chore: remove more unused stuff by jsstevenson in https://github.com/ga4gh/vrs-python/pull/332
* Issue 334: Normalization by ahwagner in https://github.com/ga4gh/vrs-python/pull/336
* fix: add rle_seq_limit to AlleleTranslator by korikuzma in https://github.com/ga4gh/vrs-python/pull/346
* feat: add param to VCFAnnotator to optionally require validation checks by korikuzma in https://github.com/ga4gh/vrs-python/pull/345
* cicd: update branch name in release.yml by korikuzma in https://github.com/ga4gh/vrs-python/pull/348


**Full Changelog**: https://github.com/ga4gh/vrs-python/compare/2.0.0-a2...2.0.0-a3

2.0.0a2

What's Changed
* cicd: update release.yml to use trusted publisher by korikuzma in https://github.com/ga4gh/vrs-python/pull/271
* build: properly pin pydantic v2 major version by korikuzma in https://github.com/ga4gh/vrs-python/pull/273
* fix: gnomad_re should accept all nucleotide characters for ref/alt by korikuzma in https://github.com/ga4gh/vrs-python/pull/278
* cicd: use single quotes in if condition for branch name by korikuzma in https://github.com/ga4gh/vrs-python/pull/282
* fix: ensure extra fields present in jsonschema by jsstevenson in https://github.com/ga4gh/vrs-python/pull/284
* build(deps): remove jsonschema dependency by jsstevenson in https://github.com/ga4gh/vrs-python/pull/285
* docs: Update README for running notebooks (286) by korikuzma in https://github.com/ga4gh/vrs-python/pull/288
* VCFAnnotator updates to skip REF alleles and emit correct INFO field definitions by ehclark in https://github.com/ga4gh/vrs-python/pull/299
* Output VRS_Error INFO field for VCF sites where VRS computation fails by ehclark in https://github.com/ga4gh/vrs-python/pull/301
* Output "." instead of blank string in VCF INFO fields by ehclark in https://github.com/ga4gh/vrs-python/pull/302
* Add memoization to data proxy methods to improve performance by ehclark in https://github.com/ga4gh/vrs-python/pull/304
* Enhancements to improve VRS computation performance by ehclark in https://github.com/ga4gh/vrs-python/pull/310

New Contributors
* ehclark made their first contribution in https://github.com/ga4gh/vrs-python/pull/299

**Full Changelog**: https://github.com/ga4gh/vrs-python/compare/2.0.0-a1...2.0.0-a2

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