- Converting between different types of gene identifiers
- Searching for terms in the Gene Ontology (GO) associated with a keyword
- Looking up housekeeping genes and transcription factors
- Getting a list of GO terms associated with a given gene
- Looking up how a gene is expressed across tissues
- Normalizing a matrix of gene expression data by converting to TPM
For more information and example use cases of `genemunge`, take a look through the code and this [bioRxiv preprint](https://www.biorxiv.org/content/early/2018/04/10/299107).