Genet

What's Changed
* Change pyproject.toml for MacOS by Goosang-Yu in https://github.com/Goosang-Yu/genet/pull/93

Installation for M1/M2 Apple silicon is now supported!
The issue reported by francoiskroll (92) is now solved.

During GenET installation using pip, it will install tensowflow depending on OS platform.

dependencies = [
'pandas',
'regex',
'biopython',
'torch',
'tensorflow < 2.10.0 ; platform_system != "Darwin"',
'tensorflow-macos < 2.10.0 ; platform_system == "Darwin"',
'protobuf <= 3.20.3',
'silence_tensorflow',
'pyarrow',
'fastparquet',
'tqdm',
'editdistance',
'viennarna',
]




**Full Changelog**: https://github.com/Goosang-Yu/genet/compare/0.15.0...0.15.1

python
from genet.predict import DeepPrime

seq = 'CCGAGTTGGTTCATCATCATTCAACGGTGGCCGACGGGCTCATCACCACGCTCCATTATC(C/T)AGCCCCAAAGCGCAACAAGCCCACTGTCTATGGTGTGTCCCCCAACTACGACAAGTGGGA'

pegrna = DeepPrime(seq)


3. DeepPrimeGuideRNA
- Input sequences in uppercase or lowercase give different outputs, reported by francoiskroll (89)
- Bug fixed ae059ec9819909b4f96fa1ecbc597d6a3abf8378

4. Torch > 2.0 supported
- Version dependency changed 65dc2d80ec22e6cbd08be17d92efb7ef3d25a1e0
- ViennaRNA and torch now installed with GenET 65dc2d80ec22e6cbd08be17d92efb7ef3d25a1e0


**Full Changelog**: https://github.com/Goosang-Yu/genet/compare/0.14.1...0.15.0

**Full Changelog**: https://github.com/Goosang-Yu/genet/compare/0.14.0...0.14.1

**Full Changelog**: https://github.com/Goosang-Yu/genet/compare/0.13.7...0.14.0

What's Changed
* Update DeepPrimeGuideRNA and release 0.13.7 by Goosang-Yu in https://github.com/Goosang-Yu/genet/pull/73


**Full Changelog**: https://github.com/Goosang-Yu/genet/compare/0.13.6...0.13.7

**Full Changelog**: https://github.com/Goosang-Yu/genet/compare/0.13.5...0.13.6