Graphbin2

Latest version: v1.2.3

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1.2.3

* Includes minor bug fixes.
* Please report any issues and suggestions under [GraphBin2 Issues](https://github.com/Vini2/GraphBin2/issues).

**Full Changelog**: https://github.com/metagentools/GraphBin2/compare/v1.2.2...v1.2.3

1.2.2

* Major code refactor to be able to install as a package.
* Replaced `setup.py` with `pyproject.toml`.
* Now installable with `flit` instead of `pip`.
* Includes minor bug fixes.
* Added Read the Docs documentation.
* Please report any issues and suggestions under [GraphBin2 Issues](https://github.com/Vini2/GraphBin2/issues).

**Full Changelog**: https://github.com/metagentools/GraphBin2/compare/v1.2.1...v1.2.2

1.2.1

* Replaced `argparse` with `click`.
* Added sample testing data.
* Includes minor bug fixes.
* Please report any issues and suggestions under [GraphBin2 Issues](https://github.com/Vini2/GraphBin2/issues).

**Full Changelog**: https://github.com/metagentools/GraphBin2/compare/v1.1...v1.2.1

1.1

* Added support for Flye long-read assemblies.
* Includes minor bug fixes.
* Please report any issues and suggestions under [GraphBin2 Issues](https://github.com/Vini2/GraphBin2/issues).

**Full Changelog**: https://github.com/metagentools/GraphBin2/compare/v1.0...v1.1

**Note:** We have developed GraphBin2 for Illumina short reads, and the long-read assemblies from Flye might have sparsely connected graphs. This can make the label propagation less effective and may not result in improvements.

1.0

* This is the first stable release of GraphBin2.
* Added logging for GraphBin2.
* Provided support scripts to format the initial binning result.
* Added functionality to specify the delimiter.
* Fixed naming issue with SPAdes contigs.

**Full Changelog**: https://github.com/metagentools/GraphBin2/compare/v0.2...v1.0

Please report any issues and suggestions under [GraphBin2 Issues](https://github.com/Vini2/GraphBin2/issues).

0.2

* This is the second pre-release of GraphBin2.
* Added Conda environment for GraphBin2.
* Added progress bars for tasks.
* Contains minor code refactoring.
* This release may contain bugs and unhandled errors.

**Full Changelog**: https://github.com/metagentools/GraphBin2/compare/v0.1...v0.2

Please report any issues and suggestions under [GraphBin2 Issues](https://github.com/Vini2/GraphBin2/issues).

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