Locidex

Latest version: v0.3.0

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1.0dev

Initial release of phac-nml/locidex

`Added`

Added locidex workflow mermaid code to ./assets/

Created CHANGELOG.md

`Fixed`

Changed README format to standard DAAD README

Changed locidex workflow to mermaid format

`Dependencies`

`Deprecated`

0.3.0

`Added`

- Option to `locidex merge` to correct/change the profile used in the output from the one found in the MLST profile key via an argument `--profile_ref`/`-p` [PR 39](https://github.com/phac-nml/locidex/pull/39)

0.2.3

`Fixed`

- Added error handling to `getpass.getuser()` when to prevent throwing an error when there is no user UID such as when running the container in docker. [PR 37](https://github.com/phac-nml/locidex/pull/37)

- Removed print debug statement from `report.py`. [PR 37](https://github.com/phac-nml/locidex/pull/37)

0.2.2

`Fixed`

- Removed suffix from created databases, this resolves an issue where databases are not found as the wrong suffix is passed to the database option [PR 36](https://github.com/phac-nml/locidex/pull/36)

0.2.1

`Fixed`

- Changed default data format for database configs to year-month-day format [PR 32](https://github.com/phac-nml/locidex/pull/32/commits/3afbd16880c9e70738fa73f7adfcedda59825983)

0.2.0

`Added`

- Incorporated both unit tests and end-to-end tests for workflows

- Introduced manifest module for management of multiple databases

`Fixed`

- Reduced code coupling issue by removing incorporating dataclasses over dictionaries. Changes were made in a backwards compatible fashion.

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