Metakb

Latest version: v1.1.0

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2.0.0dev0

What's Changed
* cicd: update sc_product_id by korikuzma in https://github.com/cancervariants/metakb/pull/228
* build!: update civicpy build to 3.x.x by korikuzma in https://github.com/cancervariants/metakb/pull/233
* refactor: cleanup harvester classes by korikuzma in https://github.com/cancervariants/metakb/pull/234
* chore: remove requirements files by korikuzma in https://github.com/cancervariants/metakb/pull/239
* feat!: update transformers to use vrs 2-alpha and gk-pilot schemas by korikuzma in https://github.com/cancervariants/metakb/pull/245
* refactor!: fix class name casing by korikuzma in https://github.com/cancervariants/metakb/pull/247
* feat: add support for TherapeuticSubstituteGroup in CIViC by korikuzma in https://github.com/cancervariants/metakb/pull/249
* feat: add support for CombinationTherapy by korikuzma in https://github.com/cancervariants/metakb/pull/251
* fix: civic variant aliases should be a list + pydantic warning by korikuzma in https://github.com/cancervariants/metakb/pull/252
* change: snp ids should not be in civic aliases during transform by korikuzma in https://github.com/cancervariants/metakb/pull/257
* build: update thera-py + fix TherapyQueryHandler instantiation by korikuzma in https://github.com/cancervariants/metakb/pull/259
* fix: key error in MoaHarvester _get_feature by korikuzma in https://github.com/cancervariants/metakb/pull/258
* change: snp ids should not be in civic mp aliases during transform by korikuzma in https://github.com/cancervariants/metakb/pull/260
* test: update moa source 44 title by korikuzma in https://github.com/cancervariants/metakb/pull/262
* tests: update civic + moa test data by korikuzma in https://github.com/cancervariants/metakb/pull/276
* feat: include additional therapy/disease normalizer data in CDM by korikuzma in https://github.com/cancervariants/metakb/pull/288
* build!: update dependencies and ga4gh digests by korikuzma in https://github.com/cancervariants/metakb/pull/300
* test: update civicpy cache data by korikuzma in https://github.com/cancervariants/metakb/pull/302
* chore: remove unused delta class by korikuzma in https://github.com/cancervariants/metakb/pull/306
* feat!: update database to reflect schema changes by korikuzma in https://github.com/cancervariants/metakb/pull/266
* cicd: update release.yml (publish python distribution to pypi) by korikuzma in https://github.com/cancervariants/metakb/pull/307
* fix: creating location parameterized query string by korikuzma in https://github.com/cancervariants/metakb/pull/310
* feat!: update `/search/studies` endpoint by korikuzma in https://github.com/cancervariants/metakb/pull/279
* cicd: update elastic beanstalk commands by korikuzma in https://github.com/cancervariants/metakb/pull/280
* Add lab template CICD actions by jsstevenson in https://github.com/cancervariants/metakb/pull/297
* build: configure setuptools in pyproject.toml by jsstevenson in https://github.com/cancervariants/metakb/pull/298
* style: use ruff by jsstevenson in https://github.com/cancervariants/metakb/pull/313
* cicd: adjust installation checks by jsstevenson in https://github.com/cancervariants/metakb/pull/316
* test: fix test data dir + update param name change by korikuzma in https://github.com/cancervariants/metakb/pull/319
* chore: remove unused files by korikuzma in https://github.com/cancervariants/metakb/pull/321
* fix: add support for civic ash source type by korikuzma in https://github.com/cancervariants/metakb/pull/323
* chore: remove analysis dir by korikuzma in https://github.com/cancervariants/metakb/pull/320
* feat: use MOA representative coordinate to create PSC members by korikuzma in https://github.com/cancervariants/metakb/pull/312
* cicd: add action for closing issue when merged into staging by korikuzma in https://github.com/cancervariants/metakb/pull/325
* cicd: fix elastic beanstalk deployment by korikuzma in https://github.com/cancervariants/metakb/pull/326
* fix: replace `StrEnum` with `Enum` by korikuzma in https://github.com/cancervariants/metakb/pull/328
* refactor!: update cli by korikuzma in https://github.com/cancervariants/metakb/pull/324


**Full Changelog**: https://github.com/cancervariants/metakb/compare/1.2.0-dev0...2.0.0-dev0

1.2.0dev0

What's Changed
* feat: add oncokb as a source (170) by korikuzma in https://github.com/cancervariants/metakb/pull/211
* build!: update dependencies by korikuzma in https://github.com/cancervariants/metakb/pull/217
* refactor: remove LAST_UPDATED by korikuzma in https://github.com/cancervariants/metakb/pull/221
* ci: add GH action for installing deps + remove requirements by korikuzma in https://github.com/cancervariants/metakb/pull/223
* chore: update elastic beanstalk commands by korikuzma in https://github.com/cancervariants/metakb/pull/224


**Full Changelog**: https://github.com/cancervariants/metakb/compare/v1.1.0...1.2.0-dev0

1.1.0

What's Changed
* Bump lxml from 4.9.0 to 4.9.1 by dependabot in https://github.com/cancervariants/metakb/pull/177
* docs: update readme and add readme for cli by korikuzma in https://github.com/cancervariants/metakb/pull/176
* ci: bump action versions by jsstevenson in https://github.com/cancervariants/metakb/pull/195
* build!: pin dependencies by korikuzma in https://github.com/cancervariants/metakb/pull/201
* Staging by korikuzma in https://github.com/cancervariants/metakb/pull/202


**Full Changelog**: https://github.com/cancervariants/metakb/compare/v1.1.0a9...v1.1.0

1.1.0a9

- Update variation normalizer + other dependencies

1.1.0a8

- Update requirements to remove security vulnerabilities

1.1.0a7

Not secure
- Add transformed regulatory_approval field from thera-py to therapy descriptor extensions

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