Microhapdb

Added
- A new table flagging markers with repetitive content (see 147).
- A new column in the `microhapdb.frequencies` table containing the number of observed haplotypes used to compute frequency estimates for each population group (see 151).

Changed
- Merged RSIDs resolved during database build now propagated to the final marker definition (see 149).

Fixed
- Added manual and automated fixes to ensure frequencies are formatted correcly and matche to the correct marker definition (see 150).

Fixed
- Bug with offsets table (`marker --format=offsets`) when multiple markers are defined for a locus (144).

Added
- Marker definitions for NimaGen 29-plex (see 134).
- 50 marker definitions from Zhang et al 2023 (see 136).
- 191 marker definitions from Du et al 2023 (see 137).
- Jupyter notebook for plotting database growth over time (see 135).

Changed
- Cleanup of database build code (see 133).
- Improved marker detail view now includes locus, marker, synonym, and source info (see 138).
- Updated documentation (see 139, 142).

Fixed
- Off-by-one errors in Fan 2022 marker definitions (see 140).

Added
- Italian population frequencies for 98 markers from Turchi et al 2019 (see 107).
- 21 marker definitions and population frequences from Zou et al 2022 (see 109).
- Check for overlapping microhaps from different sources during the database build (112).
- Over 1,000 marker definitions from four whole-genome screens from Yu et al 2022 (see 115, 118, 128).
- New `nomenclature` module for parsing and validating microhap identifiers (see 119).
- New `summarize` subcommand for summarizing MicroHapDB database contents (see 120).
- 1,000 marker definitions from Zhu et al 2023 (see 125, 131).
- New check during database build time to make sure that markers sharing the same name actually occupy the same locus (see 128).

Changed
- Overhaul of the marker table structure and database build procedure (see 106, 111, 112).
- Use Byrska-Bishop 2022 instead of Auton 2015 for main frequency and Ae calculations (see 106, 112, 114, 130).
- Marker FASTA output now produces a single sequence per locus, even when multiple markers at a locus are defined (124).

Fixed
- Test suite execution bug.

Fixed
- Bundling of files used for automated test suite.