Mirtop

Latest version: v0.4.28

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1.2

* ` TOOLS:` is added as required in the header of the file.

1.1

* UID is following exactly MINTplates licenses since this commit: 7f7717d5f23ea638f1a14fccc6386e1dbb8a7e1a in mirtop applied
* iso_5p and iso_3p changed their meaning. Nows the sign means whether the isomiR starts or ends upstream or downstream the refence sequence. This mainly affects iso_5p where the sign will be the opposite than in version 1.0. `-` -> `+` and `+` -> `-`.
* `snp` word was change to `snv` to support any kind of variant
* `iso_add` is renamed to `iso_add3p` and the category `iso_add5p` is added to the list

0.4.28

* fix random order in Variant field [84](https://github.com/miRTop/mirtop/issues/83)

0.4.27

* fix possible duplication of lines [80](https://github.com/miRTop/mirtop/issues/80)
* accept prefix for gff output [84](https://github.com/miRTop/mirtop/issues/84)

0.4.26

* Support spaces and special characters in bam files

0.4.25

* [fix outliers samples](https://github.com/nf-core/smrnaseq/issues/137). When there is no identification of reference sequences or isomirs, the multiqc module will fails because it won't find the expected keys. Adding 0 when is the case.

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