Modisco-lite

Latest version: v2.3.2

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2.3.2

==============

gapped_kmer
-----------

- Fixed minor bug that would cause a crash when there are not enough
gkmers. Thanks austintwang!

2.3.1

==============

modisco
-------

- Fixed minor bug with final flank to add not being applied correctly.

2.3.0

==============

modisco
-------

- Add final_flank_to_add with default 0 to add padding to patterns at the
end of the procedure.
- Set default parameters for initial_flank_to_add to 10 and trim_window_size
to 30. This sets the window size for patterns to be 50 instead of 30.
- Add more command line arguments to expose seqlet lengths and flanks,
initial pattern lengths and flanks, and final flank additions.

2.1.0

==============

modisco
-------

- Make motif database-based reporting optional.
- Require Python 3.7.x to 3.10.x.

2.0.7

==============

modisco
-------

- Adds an error if the window is larger than the sequences.

2.0.6

==============

modisco
-------

- Adds an explicit casting of the one-hot encoded sequence and the
attributions to 32-bit floats. This allows files to be compressed to
16-bit floats to save space.

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