* Patch to restrict NumPy version to <2.0.0 for TF compatibility
1.8.0
* Migrated to pyproject.toml and removed setup.py * Increased default minimum SV read coverage from 2 to 4 * Modified nanoinsight installation to manual and optional (for conda compatibility) * Removed "htmlark" package requirement (for conda compatibility) * Removed "progress" package requirement * Fixed for 89 bedtools getfasta bug * Fixed y-axis log scale bug in report * Added samtools and minimap2 path in logs * Added version in stdout logs
1.7.1
* Quick fix for 89 bedtools getfasta bug * Fixed y-axis log scale bug in report * Added samtools and minimap2 path in logs * Added version in stdout logs
1.7.0
* Added alternative sequence for INS and DEL in VCF * Added CRAM input support * Modified SV ID format with addition of SV type, from nv_SV?-????? to NV.INS.SV?-????? * SV size now takes the median size amongst clustered reads, instead of the largest
1.6.2
* Fixed bug where some supplementary alignments do not have primary alignments, in the case of a subsample BAM input
1.6.1
* Fix Tensorflow 2.16 compatibility issue, restrict tensorflow-cpu<=2.15.1 in setup.py