Napari-tomotwin

Latest version: v0.4.0

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0.4.0

This releases introduces an target manager and the option to recalculate the umap for a specific cluster.

What's Changed
* Visualize targets after clusters were selected by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/29
* UMAP Recalculation: New option to recalculate UMAP for selected clusters by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/28
* Update napari 0.4.19 by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/30 https://github.com/MPI-
* New target manager by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/32

**Full Changelog**: https://github.com/MPI-Dortmund/napari-tomotwin/compare/v0.3.1...v0.4.0

0.3.1

What's Changed
* Hotfix: ROI-Circle was placed wrongly as the label layer was invisible by default by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/27


**Full Changelog**: https://github.com/MPI-Dortmund/napari-tomotwin/compare/v0.3.0...v0.3.1

0.3.0

What's Changed
* No freezing GUI when loading umap / writing targers by adding threading + Visualize loading with spinners by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/20
* Calculate label mask within napari-tomotwin by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/22
* Faster medoid calculation by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/23
* Metadata are now read from the umap by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/24 https://github.com/MPI-Dortmund/napari-tomotwin/pull/25 https://github.com/MPI-Dortmund/napari-tomotwin/pull/26


**Full Changelog**: https://github.com/MPI-Dortmund/napari-tomotwin/compare/v0.2.5...v0.3.0

0.2.5

What's Changed

* Fix a bug when calculating recursive umaps by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/19


**Full Changelog**: https://github.com/MPI-Dortmund/napari-tomotwin/compare/v0.2.4...v0.2.5

0.2.4

What's Changed

This release fixes a critical bug in the medoid calculation when using the umap workflow:

* Target calculation corrupted when index column is present by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/18

Without this fix, the medoid estimation was corrupted and gave wrong positions. Especially when selecting relatively large clusters, this could lead to significantly worse results.

**Full Changelog**: https://github.com/MPI-Dortmund/napari-tomotwin/compare/v0.2.3...v0.2.4

0.2.3

What's Changed
* Add magicgui to requirements by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/16
* Use complementary colors when highlight picks in the umap by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/17
* Add multiple anchor points by thorstenwagner in https://github.com/MPI-Dortmund/napari-tomotwin/pull/15


**Full Changelog**: https://github.com/MPI-Dortmund/napari-tomotwin/compare/v0.2.2...v0.2.3

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