Nipet

Latest version: v2.2.0

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2.2.0

- add `mmrprj.back_prj(div_sino=None)` CUDA convenience
- add & expose projector `sync=True` CUDA optimisation
- add `bprj(output=None)` convenience (follow-up to 36, part of 33)
- remove unneeded `aw2ali`
- add `mmraux.remgaps` CuVec support
- clean `.cuvec` usages (https://github.com/AMYPAD/CuVec/pull/17)
- use `nimpa.dcm2nii`
- drop `PATHTOOLS` & `REGPATH` (40)
- support py3.10
- misc fixes
- misc tests updates

2.1.0

- cmake: allow linking shared libs for external builds
- cmake: expose `NIPET_CU_THREADS=1024`
- cmake: fix multi-arch CUDA support
- setup: move hardware attenuation maps logic to runtime
- optimisation: use [CuVec](https://github.com/AMYPAD/CuVec) forward & back projectors (#36)
- update `logging` usage
- update `resources`
- update GIF parcellation file recognition
- fix memory leaks (39)
- fix device ID detection with NInst
- fix deprecation warnings
- fix RTX & reduced rings bugs
- fix & update `get_norm()`
- fix span-1 sinogram numbers in scatter and pipe recon
- fix generating aligned mu-maps when loading existing ones
- fix `np.bool` deprecation
- fix editable installation
- docs: update examples/demo
- format: misc tidy & linting
- major build & test framework updates (32)
+ automate code formatting & basic bug detection
+ isolate test env
+ separate check & deploy
+ add test runner dependencies
+ update pre-commit hooks
+ cmake: static CUDA lib linking
+ use `clang-format`

2.0.0

Features

- support Python3.6+ (15 <- 14)
- add customisable PSF resolution modelling kernel (31, 25)
+ support all of: scanner measured, manual Gaussian, and custom separable PSF kernels
- prevent floating point division errors (25, 23)
- improve `classify_input`
+ add optional directory recursion (24)
+ basic `pathlib` support
- fix & upgrade `logging` (9, 5)
+ provide & use new `LOG_FORMAT`
- fix & update dependencies
- fix & update example notebook (13, 9)
- fix nonexistent paths (22)
- add progressbar (4)

Installation/build framework

- support Python3.6+ (15 <- 14)
+ drop Python 2 compatibility
+ drop `py<=3.5` which are unsupported by `ninst<-miutil[cuda]<-pynvml` and no longer receive security fixes anyway
- add tests (29)
+ including helpers for downloading data
+ add cloud testing
+ add coverage reporting
- fix warnings (28, 27)
+ update CMake policies & fix Python deprecation warnings
- improve CUDA code (28, 27)
+ better error handling
+ de-deuplication
+ better linking
+ fix compiler warnings
+ remove unneeded variables
+ put `> stream[%d]` messages on one line
+ only create poisson distribution if needed (19)
- fix `conda` install
- allow non-interactive installation (17, 9)
+ allow setting `PATHTOOLS` & `HMUDIR` from env vars
- new build framework (30, 27)
+ cmake/cuda build overhaul
+ move metadata `setup.py` -> `setup.cfg`
+ allows `pip install nipet` on a completely clean system (no `numpy`, no `miutil[cuda]`, no `-e`, no `--no-binary :all:`)
+ replace `dinf` module => `miutil.cuinfo` (26 <- 18)
+ rely on `numpy`, `miutil[cuda]`, `ninst`, `scikit-build`, `cmake>=3.18`, `ninja`
* all auto-installed at setup-time!
* get rid of `cudasetup.py`
* get rid of `install_tools.py`
* get rid of `resources.py`
+ use new `CMAKE_CUDA_ARCHITECTURES` policy
+ use new project `LANGUAGES` specification
+ support `python setup.py clean`
- basic code tidy (particularly import ordering)
- update `.gitignore`, `README.rst` badges (9, 4)

1.1.22

Final v1 (Python2) release

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