Nobrainer

🐛 Bug Fix

- Fix PGAN notebook [319](https://github.com/neuronets/nobrainer/pull/319) ([satra](https://github.com/satra) [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))
- fix dependencies [318](https://github.com/neuronets/nobrainer/pull/318) ([satra](https://github.com/satra))
- Update setup.cfg to add cuda option [309](https://github.com/neuronets/nobrainer/pull/309) ([satra](https://github.com/satra))
- [pre-commit.ci] pre-commit autoupdate [294](https://github.com/neuronets/nobrainer/pull/294) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]) [satra](https://github.com/satra) [hvgazula](https://github.com/hvgazula))

Authors: 3

- [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot])
- H Gazula ([hvgazula](https://github.com/hvgazula))
- Satrajit Ghosh ([satra](https://github.com/satra))

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🚀 Enhancement

- Dev [295](https://github.com/neuronets/nobrainer/pull/295) ([hvgazula](https://github.com/hvgazula) [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]) [satra](https://github.com/satra))
- Update setup.cfg [299](https://github.com/neuronets/nobrainer/pull/299) ([satra](https://github.com/satra))

🐛 Bug Fix

- Update release.yml ([satra](https://github.com/satra))
- change hyphenation [275](https://github.com/neuronets/nobrainer/pull/275) ([satra](https://github.com/satra))
- update precommit checks [275](https://github.com/neuronets/nobrainer/pull/275) ([satra](https://github.com/satra))
- fix docker syntax [275](https://github.com/neuronets/nobrainer/pull/275) ([satra](https://github.com/satra))
- remove trained models [275](https://github.com/neuronets/nobrainer/pull/275) ([satra](https://github.com/satra))
- [pre-commit.ci] pre-commit autoupdate [269](https://github.com/neuronets/nobrainer/pull/269) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))

Authors: 3

- [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot])
- H Gazula ([hvgazula](https://github.com/hvgazula))
- Satrajit Ghosh ([satra](https://github.com/satra))

---

🐛 Bug Fix

- Small changes to support long, preemptable training runs [267](https://github.com/neuronets/nobrainer/pull/267) ([ohinds](https://github.com/ohinds) [satra](https://github.com/satra))
- [pre-commit.ci] pre-commit autoupdate [268](https://github.com/neuronets/nobrainer/pull/268) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))

Authors: 3

- [ohinds](https://github.com/ohinds)
- [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot])
- Satrajit Ghosh ([satra](https://github.com/satra))

---

🚀 Enhancement

- Changes required to support the warmstart guide notebook [266](https://github.com/neuronets/nobrainer/pull/266) ([ohinds](https://github.com/ohinds) [satra](https://github.com/satra) [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))

🐛 Bug Fix

- Fix some typos using codespell [262](https://github.com/neuronets/nobrainer/pull/262) ([yarikoptic](https://github.com/yarikoptic) [satra](https://github.com/satra))
- [pre-commit.ci] pre-commit autoupdate [263](https://github.com/neuronets/nobrainer/pull/263) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]) [satra](https://github.com/satra))
- Remove unnecessary keepalive runner [265](https://github.com/neuronets/nobrainer/pull/265) ([ohinds](https://github.com/ohinds))
- Dynamically provision self-hosted runner [264](https://github.com/neuronets/nobrainer/pull/264) ([ohinds](https://github.com/ohinds))

Authors: 4

- [ohinds](https://github.com/ohinds)
- [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot])
- Satrajit Ghosh ([satra](https://github.com/satra))
- Yaroslav Halchenko ([yarikoptic](https://github.com/yarikoptic))

---

💥 Breaking Change

- `nobrainer` dataset API rework [261](https://github.com/neuronets/nobrainer/pull/261) ([ohinds](https://github.com/ohinds) [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]) [satra](https://github.com/satra))

🐛 Bug Fix

- Fix Dockerfiles and add GitHub Actions job [252](https://github.com/neuronets/nobrainer/pull/252) ([kabilar](https://github.com/kabilar) [satra](https://github.com/satra))
- Self-hosted runner weekly keepalive [260](https://github.com/neuronets/nobrainer/pull/260) ([ohinds](https://github.com/ohinds))
- [pre-commit.ci] pre-commit autoupdate [253](https://github.com/neuronets/nobrainer/pull/253) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]) [satra](https://github.com/satra))
- Processing model checkpointing [256](https://github.com/neuronets/nobrainer/pull/256) ([ohinds](https://github.com/ohinds) [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]) [satra](https://github.com/satra))
- Verify that the ec2 instance we started is where we are running. [257](https://github.com/neuronets/nobrainer/pull/257) ([ohinds](https://github.com/ohinds))
- Training from warm start with multiple GPUs [251](https://github.com/neuronets/nobrainer/pull/251) ([ohinds](https://github.com/ohinds) [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))

Authors: 4

- [ohinds](https://github.com/ohinds)
- [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot])
- Kabilar Gunalan ([kabilar](https://github.com/kabilar))
- Satrajit Ghosh ([satra](https://github.com/satra))

---

🚀 Enhancement

- Remove guide [243](https://github.com/neuronets/nobrainer/pull/243) ([ohinds](https://github.com/ohinds) [satra](https://github.com/satra))

🐛 Bug Fix

- [pre-commit.ci] pre-commit autoupdate [247](https://github.com/neuronets/nobrainer/pull/247) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]) [satra](https://github.com/satra))
- Fix 246: Transforms now return labels if passed [250](https://github.com/neuronets/nobrainer/pull/250) ([ohinds](https://github.com/ohinds) [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))
- Check out the master branch of the book repo on CI [249](https://github.com/neuronets/nobrainer/pull/249) ([ohinds](https://github.com/ohinds))
- Nobrainer book guide examples run on AWS EC2 as a form of regression testing [248](https://github.com/neuronets/nobrainer/pull/248) ([ohinds](https://github.com/ohinds))
- [pre-commit.ci] pre-commit autoupdate [236](https://github.com/neuronets/nobrainer/pull/236) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]) [satra](https://github.com/satra))
- Multi-GPU support [242](https://github.com/neuronets/nobrainer/pull/242) ([ohinds](https://github.com/ohinds) [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))
- [pre-commit.ci] pre-commit autoupdate [234](https://github.com/neuronets/nobrainer/pull/234) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))
- [pre-commit.ci] pre-commit autoupdate [232](https://github.com/neuronets/nobrainer/pull/232) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))
- [pre-commit.ci] pre-commit autoupdate [231](https://github.com/neuronets/nobrainer/pull/231) ([pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot]))

⚠️ Pushed to `master`

- Update setup.cfg ([satra](https://github.com/satra))
- Update ci.yml ([satra](https://github.com/satra))
- update python and tensorflow versions ([satra](https://github.com/satra))
- [CI] update python and auto versions ([satra](https://github.com/satra))
- replace special branch ([satra](https://github.com/satra))

Authors: 3

- [ohinds](https://github.com/ohinds)
- [pre-commit-ci[bot]](https://github.com/pre-commit-ci[bot])
- Satrajit Ghosh ([satra](https://github.com/satra))

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