Initial release.
<!-- Release notes generated using configuration in .github/release.yml at main -->
What's Changed
* import the healpy regridding by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/2
* step 3: compute the emission probability matrix from the regridded differences by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/4
* workflow execution by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/6
* step 4: emission probability matrix from acoustic detections by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/7
* only parametrize notebooks that have a configuration file by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/8
* step 5: optimization by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/9
* small performance optimization for the optimization using `optuna` by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/10
* steps 6 and 7: state probabilities and state decoding by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/12
* fix the implementation of the backwards algorithm by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/13
* describe the installation process by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/14
* Add plot notebook by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/15
* testing copernicus by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/16
* update variable name and file path, verification with Copernicus OK by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/18
* Rename path by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/19
* update path by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/20
* treat the final probability as a modifier for the emission matrix by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/22
* update workflow script and add how to use workflow scripts in readme by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/23
* Adding documentation by aderrien7 in https://github.com/pangeo-fish/pangeo-fish/pull/21
* Reorganise conf by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/25
* bug fix by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/26
* update default configuration with A18832 by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/27
* Papermilfix by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/28
* use deployment_id for acoustic receptor location by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/29
* Deployment by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/30
* Enable fish intel tag data analysis to run on datarmor by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/31
* Fix by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/32
* change the regridding step to use `xarray-healpy` by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/33
* Viterbi by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/34
* merge the series of workflow notebooks into a single one by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/36
* move the data wrangling for the catalog into the library by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/37
* refactor the data cleaning and subtraction by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/39
* package dependencies by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/42
* fix_path by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/44
* make use of the new tag data format by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/53
* tagging events and time data by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/54
* get the workflow to work with the changed structure by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/55
* accept missing acoustic detections by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/57
* allow choosing the output format for the tracks by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/59
* recompute the cell ids by default by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/64
* explicitly specify the chunking on open by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/61
* allow missing receiver deployment data by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/63
* add back the additional track quantities by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/62
* use `tag_name` instead of trying to pull it out of the metadata by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/66
* visualization of the results by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/52
* move all model preparation to `open_copernicus_catalog` by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/68
* improve the styling of the animation by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/69
* fix the combination of emission matrices in the absence of `final` by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/76
* command-line script for batch processing of multiple tags by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/70
* complete_full_workflow by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/79
* remove the deployment-specific parts by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/40
* Accept s3 by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/81
* No rotation by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/82
* take out rotation from example by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/84
* Fix acoustic chunk save_html by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/85
* `pre-commit` hook maintenance by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/90
* pin `xarray-regridding` by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/91
* remove the original estimator implementation by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/92
* rename the estimator by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/93
* use `zarr` to perform the propagation by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/88
* allow using the `CachedEstimator` in the cli by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/94
* patch xarray-healpy renaming issue by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/99
* Update wrapper for calling scipy by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/101
* Pr 95 by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/104
* pass `float` values to the `scipy` optimizer by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/106
* Coastal variability by tinaok in https://github.com/pangeo-fish/pangeo-fish/pull/100
* cast the returned score to float by capetienne in https://github.com/pangeo-fish/pangeo-fish/pull/116
* Update dependencies by yellowcap in https://github.com/pangeo-fish/pangeo-fish/pull/107
* properly determine the model range from the tag data by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/118
* Catching up 112: warnings in case of missing receivers by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/120
* Catching up 111: new reference model by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/119
* Warning into Exception in case of missing receivers by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/123
* Bbox argument in create_frame by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/122
* Catching up 115: optimizing create_masked_fill_map by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/117
* pre-commit hook maintenance by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/129
* Removed datatree import from datatree by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/128
* Healpix convolution by capetienne in https://github.com/pangeo-fish/pangeo-fish/pull/127
* Fixed numpy casting by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/134
* Rendering images with xr.Dataset.map_blocks() by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/130
* depend on the released `healpix-convolution` by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/138
* create a standard ci workflow by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/141
* first set of unit tests by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/142
* second set of tests by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/146
* Handling missed out predictions during scoring by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/147
* third set of tests by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/148
* Helper Functions by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/144
* Updated CI's requirements. by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/156
* move `xdggs` back into the pip section by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/158
* Documentation by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/143
* Release workflow by QuentinMaz in https://github.com/pangeo-fish/pangeo-fish/pull/157
* fourth set of tests: estimators by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/149
* follow-up to the repository transfer by keewis in https://github.com/pangeo-fish/pangeo-fish/pull/162
New Contributors
* keewis made their first contribution in https://github.com/pangeo-fish/pangeo-fish/pull/2
* aderrien7 made their first contribution in https://github.com/pangeo-fish/pangeo-fish/pull/21
* capetienne made their first contribution in https://github.com/pangeo-fish/pangeo-fish/pull/116
* yellowcap made their first contribution in https://github.com/pangeo-fish/pangeo-fish/pull/107
**Full Changelog**: https://github.com/pangeo-fish/pangeo-fish/commits/2025.03.0