Expose min_dist option as `--min-dist/-m` in the CLI
1.1.0
Adjust computation of threshold to compute CNR instead of SNR.
1.0.0
* last column of output file renamed (snr -> cnr) * `-s/--snr` argument renamed to `-c/--cnr`
0.6.1
* Fix occasional crash due to rounding errors in sparse matrices leading to unequal sparsity between samples * Fix crash when loading custom kernel matrices from text files * Add docs and tutorial via sphinx
0.6.0
* Remove unused "mode" option * Stabilize SNR value to avoid absurdly high values when all replicates have the same corrcoeff
0.5.0
More flexible filters: * SNR, density and pearson filtering threshold can be changed in the CLI * Filtering thresholds now have the Optional[float] signature throughout the CLI * Add `--no-filter` option useful for debugging or to keep differential score for all input positions regardless of noise