Pyiron-base

- pyiron without database: Reduce need to build file table ([681](https://github.com/pyiron/pyiron_base/pull/681))
- Clean up job_type class loading ([706](https://github.com/pyiron/pyiron_base/pull/706))
- Updates for Scriptjob ([701](https://github.com/pyiron/pyiron_base/pull/701))
- Dependency updates: [699](https://github.com/pyiron/pyiron_base/pull/699)

- `Project.get_jobs_status()` now accepts `**kwargs` to select which jobs to check ([662](https://github.com/pyiron/pyiron_base/pull/662))
- Remove project reference in FileHDFio ([674](https://github.com/pyiron/pyiron_base/pull/674))
- Fix project.size for size<=0 ([689](https://github.com/pyiron/pyiron_base/pull/689))
- Do not recursively remove project ([690](https://github.com/pyiron/pyiron_base/pull/690))
- Correctly resize string arrays in FlattenedStorage ([670](https://github.com/pyiron/pyiron_base/pull/670))
- Add progress bar to Project.iter_groups ([655](https://github.com/pyiron/pyiron_base/pull/655))
- Test project size ([688](https://github.com/pyiron/pyiron_base/pull/688))
- Import math ([687](https://github.com/pyiron/pyiron_base/pull/687))
- Dependency updates: [691](https://github.com/pyiron/pyiron_base/pull/691), [#692 ](https://github.com/pyiron/pyiron_base/pull/692)

- Add functionality to 'defragment' the hdf storage within a project (local maintenance). If datasets in the hdf are overwritten, the old memory allocation is never used again and the hdf file increses in size. Rewriting it reduces the size again, which is now available at `Project('path').maintenance.local.defragment_storage()` ([673](https://github.com/pyiron/pyiron_base/pull/673))
- Fix black formatting issue ([678](https://github.com/pyiron/pyiron_base/pull/678))
- Add pint to dependencies ([685](https://github.com/pyiron/pyiron_base/pull/685))
- Dependency updates: [679](https://github.com/pyiron/pyiron_base/pull/679)

- Add method FlattenedStorage.list_arrays() to get list of all stored array names ([660](https://github.com/pyiron/pyiron_base/pull/660))
- Remote job error handling ([671](https://github.com/pyiron/pyiron_base/pull/671))
- Fix off-by-one in FlattenedStorage ([668](https://github.com/pyiron/pyiron_base/pull/668))
- Get filesize of Project ([631](https://github.com/pyiron/pyiron_base/pull/631))
- Always write error.out ([644](https://github.com/pyiron/pyiron_base/pull/644))
- Add descriptions to PyironTable progress bars ([656](https://github.com/pyiron/pyiron_base/pull/656))
- Update Documentation - Pyiron release chapter ([609](https://github.com/pyiron/pyiron_base/pull/609))
- Fix readthedocs ([675](https://github.com/pyiron/pyiron_base/pull/675))
- Dependency updates: [612](https://github.com/pyiron/pyiron_base/pull/612)
- GitHub infrastructure: [669](https://github.com/pyiron/pyiron_base/pull/669)

- Fix race condition when talking to the database, this could result in cryptic error messages "connection closed" when
performing a lot of database queries in a row ([636](https://github.com/pyiron/pyiron_base/pull/636))
- Rename compressed files on job rename ([641](https://github.com/pyiron/pyiron_base/pull/641))
- Raise ValueError when worker was aborted ([628](https://github.com/pyiron/pyiron_base/pull/628))
- Worker - check memory during multiprocessing run ([620](https://github.com/pyiron/pyiron_base/pull/620))
- Script job support MPI run ([637](https://github.com/pyiron/pyiron_base/pull/637))
- Set default project for WorkerJob ([645](https://github.com/pyiron/pyiron_base/pull/645))
- Mention wrong column name in error message ([647](https://github.com/pyiron/pyiron_base/pull/647))
- Specify units for memory limit ([635](https://github.com/pyiron/pyiron_base/pull/635))
- Dependency updates: [653](https://github.com/pyiron/pyiron_base/pull/653), [#632](https://github.com/pyiron/pyiron_base/pull/632), [#648](https://github.com/pyiron/pyiron_base/pull/648), [#649](https://github.com/pyiron/pyiron_base/pull/649), [#650](https://github.com/pyiron/pyiron_base/pull/650), [#646](https://github.com/pyiron/pyiron_base/pull/646)

- Update CHANGELOG.md ([639](https://github.com/pyiron/pyiron_base/pull/639))
- Convert boolean config keys ([629](https://github.com/pyiron/pyiron_base/pull/629))
- Add links to the CHANGELOG ([624](https://github.com/pyiron/pyiron_base/pull/624))
- Support secure sql passwords ([626](https://github.com/pyiron/pyiron_base/pull/626))
- use safe job name in create_job ([625](https://github.com/pyiron/pyiron_base/pull/625))
- Dependency updates: [634](https://github.com/pyiron/pyiron_base/pull/634), [#633](https://github.com/pyiron/pyiron_base/pull/633)
- GitHub infrastructure: [618](https://github.com/pyiron/pyiron_base/pull/618)