Pyteseo

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Changed:
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Fixed:
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Added:
1) preprocessing from any netcdf to teseo netcdf
2) create_forcings
3) create_domain
4) create_simulation
5) TL;DR guide added to docs
Changed:
1) up for python>=3.8
2) update documentation
3) update testing
Fixed:
1) login CMEMS was trigger at each operation
2)
3)
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Added:
1) Classes for forcings
2) Create null forcings
3) Create TeseoWrapper class
4) Create cfg and run files
5) Create *_hns.calib file
6) First integration tests runing teseo v1.2.8 (drifter, oil and hns) with cte forcings with and without coastline
7) Add general attributes to netcdf results
8) Run simulations with 2d forcings (winds and currents)
9) Add plot package with basic plots, figures and animations
Changed:
1) modules are getting too big, I split structure into subpackages
2) generalize i/o of forcings to spatially cte or 2d
3) downgrade netcdf version to hotfix netcdf library bug introduced in new versions
4) notebooks will not be a priority from now on
Fixed:
1) notebooks to run documentation ci
2) access CMEMS from the notebooks (github secret)
3) Tests in github actions (downgrade netcdf. netcdf problem, not us!)
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Added:
1) read results (particles, properties, and grids)
2) add mod calculation to read_currents and read_winds
3) notebook 02
4) add py3.11 to test workflow
5) exclude windows w/ py3.7
6) add pyteseo.export functionality
7) add pyteseo/defaults.json to centralize defaults (names, configs...)
8) add docs/notebooks/03_export_resutls.ipynb
Changed:
1) cli pyteseo-tests move to pyteseo/tests.__init__.py
Fixed:
1) added pre-commit with check-yaml, end-of-file-fixer, trailing-whitespace, black, black-jupyter and falke8
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Added:
1) required version pytest >=7
Changed:
Fixed:
1) relative paths to pyteseo installtion for notebooks
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Added:
1) add google colab for notebooks
Changed:
1) update python version requirement to 3.7
Fixed:
1) Compatibility for python versions >=3.7
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