Pyunicorn

Latest version: v0.7.0

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0.7.0

-----

Package:

- Migrated to PEP 517/518 package format
(`a6c4c83 <https://github.com/pik-copan/pyunicorn/commit/a6c4c83905fcc4b73f46643fbe2f160917755e0e>`_).
- Added full Windows support
(`159 <https://github.com/pik-copan/pyunicorn/issues/159>`_,
`160 <https://github.com/pik-copan/pyunicorn/issues/160>`_).
- Reestablished `CI <https://app.travis-ci.com/github/pik-copan/pyunicorn>`_ on Linux
(`191 <https://github.com/pik-copan/pyunicorn/issues/191>`_,
`192 <https://github.com/pik-copan/pyunicorn/pull/192>`_)
and added macOS and Windows
(`214 <https://github.com/pik-copan/pyunicorn/pull/214>`_).
- Improved `test coverage <https://app.codecov.io/gh/pik-copan/pyunicorn?search=&trend=all%20time>`_.
- Discontinued Python 3.7 support
(`4cf6969 <https://github.com/pik-copan/pyunicorn/commit/4cf6969c40de39f01f31ea141767ec67cc3d6d31>`_).
- Replaced optional dependecy ``netcdf4`` with ``h5netcdf``
(`cd8ee00 <https://github.com/pik-copan/pyunicorn/commit/cd8ee00a534c0eae9440414d38a0eaaa5100aaec>`_,
`12 <https://github.com/pik-copan/pyunicorn/issues/12>`_,
`210 <https://github.com/pik-copan/pyunicorn/issues/210>`_).
- Replaced outdated ``progressbar`` with ``tqdm``
(`202 <https://github.com/pik-copan/pyunicorn/pull/202>`_).

Documentation:

- Added new tutorials
(`175 <https://github.com/pik-copan/pyunicorn/pull/175>`_,
`180 <https://github.com/pik-copan/pyunicorn/pull/180>`_,
`190 <https://github.com/pik-copan/pyunicorn/pull/190>`_).
- Edited tutorials and included notebooks in documentation
(`179 <https://github.com/pik-copan/pyunicorn/pull/179>`_,
`185 <https://github.com/pik-copan/pyunicorn/issues/185>`_,
`213 <https://github.com/pik-copan/pyunicorn/pull/213>`_).

New/Updated functionality:

- Generalized spatial and interacting network analysis
(`131 <https://github.com/pik-copan/pyunicorn/pull/131>`_):
added ``SpatialNetwork`` class, added Watts-Strogatz model to ``Network``,
added new metrics to ``RecurrencePlot``, ``CoupledClimateNetwork`` and
``InteractingNetworks``.
- Added ``EventSeries`` and ``EventSeriesClimateNetwork`` classes
(`156 <https://github.com/pik-copan/pyunicorn/pull/156>`_).
- Extended n.s.i. measures in ``Network`` with directed and weighted versions
(`153 <https://github.com/pik-copan/pyunicorn/pull/153>`_).
- Replaced ``MapPlots`` class with simplified ``MapPlot`` based on ``Cartopy``
(`174 <https://github.com/pik-copan/pyunicorn/pull/174>`_,
`203 <https://github.com/pik-copan/pyunicorn/issues/203>`_).

Extensions:

- Overhauled the Python/Cython interface
(`3dab5bf <https://github.com/pik-copan/pyunicorn/commit/3dab5bf89d2e224fc319ddd64aeeecc480f27fba>`_,
`402197f <https://github.com/pik-copan/pyunicorn/commit/402197fedff6dc4ce9796b5d2c32bb63ef6ecba8>`_).
- Made Cython/C extensions compatible with MSVC
(`160 <https://github.com/pik-copan/pyunicorn/issues/160>`_,
`165 <https://github.com/pik-copan/pyunicorn/issues/165>`_).
- Ported most of the remaining C extensions to Cython
(`128 <https://github.com/pik-copan/pyunicorn/issues/128>`_,
`142 <https://github.com/pik-copan/pyunicorn/issues/142>`_,
`145 <https://github.com/pik-copan/pyunicorn/issues/145>`_,
`187 <https://github.com/pik-copan/pyunicorn/issues/187>`_,
`195 <https://github.com/pik-copan/pyunicorn/pull/195>`_).

Bug fixes:

- Resolved indexing and typing problems in extensions
(`126 <https://github.com/pik-copan/pyunicorn/issues/126>`_,
`141 <https://github.com/pik-copan/pyunicorn/issues/141>`_,
`145 <https://github.com/pik-copan/pyunicorn/issues/145>`_,
`162 <https://github.com/pik-copan/pyunicorn/issues/162>`_,
`163 <https://github.com/pik-copan/pyunicorn/issues/163>`_).
- Overhauled the memoization/caching system
(`124 <https://github.com/pik-copan/pyunicorn/issues/124>`_,
`148 <https://github.com/pik-copan/pyunicorn/issues/148>`_,
`219 <https://github.com/pik-copan/pyunicorn/pull/219>`_).
- Shifted the histogram index in ``RecurrencePlot`` line distributions
(`166 <https://github.com/pik-copan/pyunicorn/issues/166>`_,
`209 <https://github.com/pik-copan/pyunicorn/pull/209>`_).
- Resolved numerous other issues related to inheritance and method overloading,
deprecated APIs, etc. For a full list, see the `release milestone
<https://github.com/pik-copan/pyunicorn/milestone/1?closed=1>`_.

0.6.1

-----
- Fixed some bugs and compatibility issues.
- Improved test framework.
- Added ``pyunicorn`` description paper reference to all code files.

0.6.0

-----
- Migrated from Python 2.7 to Python 3.7.
- Completed transition from ``Weave`` to ``Cython``.
- Added Event Coincidence Analysis.

0.5.2

-----
- Updated test suite and CI.

0.5.1

-----
- Added reference to ``pyunicorn`` description paper published in the
journal *Chaos*.

0.5.0

-----
- Substantial update of ``CouplingAnalysis``.
- New methods in ``RecurrenceNetwork``: ``transitivity_dim_single_scale``,
``local_clustering_dim_single_scale``.
- Renamed time-directed measures in ``VisibilityGraph``: ``left/right`` ->
``retarded/advanced``.
- Improved documentation and extended publication list.
- Began transition from ``Weave`` to ``Cython``.
- Added unit tests and improved Pylint compliance.
- Set up continuous testing with Travis-CI.
- Fixed some minor bugs.

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