Qc2tsv

Latest version: v0.2.0

Safety actively analyzes 623704 Python packages for vulnerabilities to keep your Python projects secure.

Scan your dependencies

0.1.5

Update for new `pandas>=1.0.0`.
- Fix for issue https://github.com/ENCODE-DCC/chip-seq-pipeline2/issues/174#issuecomment-658513607

0.1.4

Fix for absolute path check.
Refactoring of code to remove `version.py`.

0.1.3

Fix for issue 1

0.1.2

New features:
- `--collapse-header`: A flag to collapse header lines into a single row (using dot notation for key name hierarchy)
- `--merge-split-rows`: Merge some splitted rows into a single row to prevent staggering. **DO NOT DEFINE THIS FOR ENCODE PIPELINES. DEFAULT VALUES WORK WITH ENCODE PIPELINES**.

>**IMPORTANT**: Make sure that `--regex-split-rule` and `--merge-split-rows` are consistent.

>**IMPORTANT**: There are defaults values for those two parameters and they work with ENCODE ATAC-Seq and ChIP-Seq pipelines. Output JSON file of those pipelines has a key `repN` and `ctlM` where N and M can be any integer. Whenever this key name is found, `qc2tsv` makes a new row but all keys not caught by `repN` or `ctlM` are merged with the `rep1` row.

Links

Releases

Has known vulnerabilities

© 2024 Safety CLI Cybersecurity Inc. All Rights Reserved.