Added
- getPolyAStandardizedSignal(self, readid : str, polyAstart : int, polyAend : int) -> np.ndarray
Standardize the read signal of the provided read with the polyA.
This function uses the median and mad to standardize the read with the polyA signal.
After standardization the polyA signal will have a mean of 108.901413 and a stdev of 2.676522.
Parameter
---------
readid : str
polyAstart : int
- included starting index of the polyA signal in the read
polyAend : int
- excluded ending index of the polyA signal in the read
Returns
-------
standardizedSignal : np.ndarray
- polyA standardized read signal