PR https://github.com/biocore/redbiom/pull/122 in particular included quite a few issues, as well as performance boost for fetch, a new API method for fetching a Qiita study, clean up of warnings, removal of Py3.6 from build testing (the environments won't create) and addition of Python 3.10 into the matrix.
Specific other items addressed in https://github.com/biocore/redbiom/pull/122 include:
* Allow for resolution of ambiguities while retaining the artifact ID https://github.com/biocore/redbiom/issues/119
* A particular sample always crashes for me https://github.com/biocore/redbiom/issues/117
* It would be nice to have an easy option to pull a specific qiita study https://github.com/biocore/redbiom/issues/116
* redbiom summarize taxonomy should handle no hits gracefully https://github.com/biocore/redbiom/issues/43
* redbiom search metadata NUMBER should fail gracefully https://github.com/biocore/redbiom/issues/44
* Fixing instructions in readme https://github.com/biocore/redbiom/issues/46
* If context creation fails, error gracefully https://github.com/biocore/redbiom/issues/52
* search for phrases https://github.com/biocore/redbiom/issues/50
* Where queries should support "in" correctly when the left hand is a string https://github.com/biocore/redbiom/issues/41
What's Changed
* API/PERF: allow avoiding fetch of taxonomy by wasade in https://github.com/biocore/redbiom/pull/114
* add msgpack by wasade in https://github.com/biocore/redbiom/pull/115
* ping! by antgonza in https://github.com/biocore/redbiom/pull/118
**Full Changelog**: https://github.com/biocore/redbiom/compare/0.3.8...0.3.9