Rnasamba

Latest version: v0.2.5

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0.2.5

- Fix a dependency conflict between `keras` and `h5py`.

0.2.4

- Sequences shorter than 4 nucleotides would break the program in the k-mer frequency step (as RNAsamba uses 2, 3 and 4-mers). Now, those sequences are ignored.

0.2.3

- The input FASTA file is now read only once.
- Several unnecessary loops were removed.

0.2.2

- The `longest_orf` function is now written in Rust and is ~50 times faster.
- The ORF extraction step is now parallelized.

0.2.1

- The k-mer frequency function is now written in Rust and is parallelized.

0.2.0

- The `count_kmers` function is now written in Rust and is approximately 5.5× faster than the old native Python implementation.

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