Scanpy-scripts

Latest version: v1.9.301

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1.9.301

- Move to scanpy 1.9.3 and other improvements (117)
- Change deprecated sc.read() usages for read_h5ad call (128)
- HVG genes setting through files (130)

1.1.6

What's Changed
* Update setup.py to remove t-SNE dependency by pinin4fjords in https://github.com/ebi-gene-expression-group/scanpy-scripts/pull/115


**Full Changelog**: https://github.com/ebi-gene-expression-group/scanpy-scripts/compare/v1.1.5...v1.1.6

1.1.5

What's Changed
* Add compression option to export by pinin4fjords in https://github.com/ebi-gene-expression-group/scanpy-scripts/pull/114


**Full Changelog**: https://github.com/ebi-gene-expression-group/scanpy-scripts/compare/v1.1.4...v1.1.5

1.1.4

What's Changed
* Feature/unit tests by irisdianauy in https://github.com/ebi-gene-expression-group/scanpy-scripts/pull/111
* Feature/gzip mtx output by pinin4fjords in https://github.com/ebi-gene-expression-group/scanpy-scripts/pull/112
* Add Black format checking by pinin4fjords in https://github.com/ebi-gene-expression-group/scanpy-scripts/pull/113

New Contributors
* irisdianauy made their first contribution in https://github.com/ebi-gene-expression-group/scanpy-scripts/pull/111

**Full Changelog**: https://github.com/ebi-gene-expression-group/scanpy-scripts/compare/v1.1.3...v1.1.4

1.1.3

* MTX export fix https://github.com/ebi-gene-expression-group/scanpy-scripts/pull/110

1.1.2

- Fix boolean columns during merges of extra info at read time https://github.com/ebi-gene-expression-group/scanpy-scripts/pull/109

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