Scib

Latest version: v1.1.7

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1.1.6

What's Changed
* Refactor LISI metrics by mumichae in https://github.com/theislab/scib/pull/395
* Update codecov with token by mumichae in https://github.com/theislab/scib/pull/407
* Use `scib.cl.cluster_optimal_resolution` in metrics wrapper by mumichae in https://github.com/theislab/scib/pull/405
* Use precomputed clustering by mumichae in https://github.com/theislab/scib/pull/406
* Update python-igraph dependency to igraph by szhorvat in https://github.com/theislab/scib/pull/409
* Fix lint by mumichae in https://github.com/theislab/scib/pull/414
* M.A might not be available, you should use M.toarray() by Zhongzheng99 in https://github.com/theislab/scib/pull/410
* Ensure essential packages are not detached! by zhongzheng1999 in https://github.com/theislab/scib/pull/402
* Skip labels before loop by johnarevalo in https://github.com/theislab/scib/pull/394
* Fix kBET test for 1.1.6 by mumichae in https://github.com/theislab/scib/pull/420

New Contributors
* szhorvat made their first contribution in https://github.com/theislab/scib/pull/409
* Zhongzheng99 made their first contribution in https://github.com/theislab/scib/pull/410
* zhongzheng1999 made their first contribution in https://github.com/theislab/scib/pull/402

**Full Changelog**: https://github.com/theislab/scib/compare/v1.1.5...v1.1.6

1.1.5

What's Changed
* Update dependencies by mumichae in https://github.com/theislab/scib/pull/396
* Fix argument deprecation by mumichae in https://github.com/theislab/scib/pull/404


**Full Changelog**: https://github.com/theislab/scib/compare/v1.1.4...v1.1.5

1.1.4

What's Changed
* Add GPU_id param for DESC by johnarevalo in https://github.com/theislab/scib/pull/372
* Update documentation clustering by mumichae in https://github.com/theislab/scib/pull/373
* more readable PCA computation and info retrieval by mumichae in https://github.com/theislab/scib/pull/377
* Set names when reading LISI CSV files by lazappi in https://github.com/theislab/scib/pull/380


**Full Changelog**: https://github.com/theislab/scib/compare/v1.1.3...v1.1.4

What's Changed
* Add GPU_id param for DESC by johnarevalo in https://github.com/theislab/scib/pull/372
* Update documentation clustering by mumichae in https://github.com/theislab/scib/pull/373
* more readable PCA computation and info retrieval by mumichae in https://github.com/theislab/scib/pull/377
* Set names when reading LISI CSV files by lazappi in https://github.com/theislab/scib/pull/380


**Full Changelog**: https://github.com/theislab/scib/compare/v1.1.3...v1.1.4

1.1.3

What's Changed
* Run iso label as discussed on friday by danielStrobl in https://github.com/theislab/scib/pull/370
* Scale isolated label ASW by mumichae in https://github.com/theislab/scib/pull/371
* Fix PCA regression error for sparse matrices by mumichae in https://github.com/theislab/scib/pull/364


**Full Changelog**: https://github.com/theislab/scib/compare/v1.1.2...v1.1.3

1.1.2

What's Changed
* Fix code coverage by mumichae in https://github.com/theislab/scib/pull/347
* Fix sc best practices link by mumichae in https://github.com/theislab/scib/pull/356
* Add perfect isolabel ASW test by mumichae in https://github.com/theislab/scib/pull/362
* Make louvain an optional dependency by mumichae in https://github.com/theislab/scib/pull/361
* Update isolated_labels.py by danielStrobl in https://github.com/theislab/scib/pull/368


**Full Changelog**: https://github.com/theislab/scib/compare/v1.1.1...v1.1.2

1.1.1

**Full Changelog**: https://github.com/theislab/scib/compare/v1.1.0...v1.1.1

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