Sequana-mapper

What's Changed
* put back BAM files in final output (not a temp file anymore) by cokelaer in https://github.com/sequana/mapper/pull/21
* update metadata by cokelaer in https://github.com/sequana/mapper/pull/22


**Full Changelog**: https://github.com/sequana/mapper/compare/v1.3.0...v1.3.1

What's Changed
* update pipeline to use new sequana_coverage version by cokelaer in https://github.com/sequana/mapper/pull/20


**Full Changelog**: https://github.com/sequana/mapper/compare/v1.2.1...v1.3.0

What's Changed
* Fix bwa_split by cokelaer in https://github.com/sequana/mapper/pull/19


**Full Changelog**: https://github.com/sequana/mapper/compare/v1.2.0...v1.2.1

What's Changed
* implement bwa_split to analyse large fastq files by cokelaer in https://github.com/sequana/mapper/pull/18


**Full Changelog**: https://github.com/sequana/mapper/compare/v1.1.0...v1.2.0

What's Changed
* Set sequana_coverage to False by default (to follow docstring) by khourhin in https://github.com/sequana/mapper/pull/15
* Update pipeline to filter BAM from unmapped reads by cokelaer in https://github.com/sequana/mapper/pull/13
* Update pipeline to use click. Fix coverage. by cokelaer in https://github.com/sequana/mapper/pull/16


**Full Changelog**: https://github.com/sequana/mapper/compare/v1.0.0...v1.1.0

What's Changed
* Use graphviz apptainer and workflow updates by cokelaer in https://github.com/sequana/mapper/pull/11


**Full Changelog**: https://github.com/sequana/mapper/compare/v0.12.0...v1.0.0