Sicer2

Latest version: v1.0.3

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1.0.2

Added
- Changelog file to keep track of changes to this project.

Fixed
- Fixed bug with outputting to an user-specified output directory.
- Fixed bug in `find_islands_in_pr` so that empty island lists do not trigger `IndexError`.

1.0.1

Fixed
- Fixed issue with calling BEDTools using `subprocess.call`. Instead, use `subprocess.Popen` to enable piping.
- Fixed method for getting CPU count

1.0.0

Added
- New version of SICER for improved user-friendliness and parallelization support
- Multiprocessing based on chromosomes
- RECOGNICER algorithm added
- Uses BEDTools to convert BAM file to BED automatically

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