- Add cache folder option to reuse previously generated results from a different SIMSI run (27)
- Memory and runtime optimizations (26)
- Hotfix for NaN handling in evidence assembly
- Added "Potential contaminant" column in SIMSI output based on the "Proteins" column
- Added sorting step to prevent rare event of incorrect probability strings
- Added validation option for mzml conversion
- Improved raw file converter interface
- Removing importlib dependency from poetry
- Improved SIMSI version retrieval for logger
- Added sorting of raw files to prevent downstream problems