handle fasta/default input formats on the fly, not storing them;
added byseq parameter for parallelizing over input sequences;
added fastest.conf for fast crude predictions;
see the usage example 6.
covarying
SQUARNA - an RNA secondary structure prediction method based on a greedy stem formation model
version 1.0c, dated 23.03.2024.
submit
SQUARNA - an RNA secondary structure prediction method based on a greedy stem formation model
version 1.0, dated 26.02.2024.
biorxiv
SQUARNA - an RNA secondary structure prediction method based on a greedy stem formation model
version 0.9, dated 28.08.2023.