Squidasm

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- Bugfix for simulation time not resetting between different calls of the `squidasm.run.stack.run.run` method
- Add support for S and T gates in generic qdevice

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- Relax scipy requirement to from <1.9 to <2.0
- Relax numpy requirement from <1.23 to <2.0
- Replace numpy.complex type with complex type

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- Bugfix for link noise models depolarise and discrete depolarise in multithread variant
- Added tests for link noise and hardware models for multithread variant

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- Bugfix for pydantic 2.x versions

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- Added configurable classical links.
- Added support for networks with more than two nodes.
- Added a tutorial example for a three-node network.
- Added a GHZ routine for generating entangled states.
- Added an example demonstrating usage of the GHZ routine.
- Added a utility method for generating complete graph networks.
- Added a `--test_run` flag to `run_examples.py` to indicate a test run of an example.
- Fixed the NetSquid seed in two examples to avoid accidental test run failures.
- Reworked the NetSquid simulation network creation process. The NetSquid network is now constructed using `netsquid-netbuilder` for better modularity and maintainability.
- Added tests for classical communication, multi-node classical communication, and preservation of message ordering.
- Added tests for gate operations, including gate noise and qubit decoherence effects.
- Added tests for EPR pair generation using the perfect, depolarizing, heralded-single-click, and heralded-double-click models.
- Removed support for Netqasm breakpoint requests.

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- Relaxed pydynaa and pydantic version requirements