Tadrep

Latest version: v0.9.2

Safety actively analyzes 626983 Python packages for vulnerabilities to keep your Python projects secure.

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0.9.2

This is the 2nd v0.9 patch release (v0.9.2) fixing an CLI error regarding max sequence clustering lengths.

- Fixed clustering sequence length threshold: https://github.com/oschwengers/tadrep/commit/06b48476b2ff78a087bacd8fbb56a305541ea686

0.9.1

This is the first v0.9 patch release (v0.9.1) fixing an import error of the `database` module.

0.9

This is the first release providing the new module-based UI.

With this release, TaDReP is executed as a multi-step workflow - one module and subcommand for each step:
- local setup
- Database creation from public databases
- Database creation from local plasmid sequences
- Characterization of plasmids
- Clustering of plasmids
- Detection & reconstruction of plasmids within draft genomes
- Visualization of detected & reconstructed plasmids

0.4.0

This is a last `alpha` release before a larger re-write of the entire workflow.

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