Thera-py

Latest version: v0.6.0

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0.6.0

What's Changed
* build: require python >= 3.10 by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/424
* cicd: only lint in 3.11 by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/430
* cicd: remove mypy checks by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/431
* feat: use latest VRS models by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/426
* cicd: add issue templates/stalebot by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/429
* style: update to ruff==0.5.0 by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/425
* build!: use setuptools-scm to declare version by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/428
* cicd: update precommit by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/427


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/0.5.0-dev5...0.6.0

0.5.0dev5

What's Changed
* fix: use enum for source name to ensure proper pydantic serialization by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/423


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/0.5.0-dev4...0.5.0-dev5

0.5.0dev4

What's Changed
* build: get disease ETL dependencies by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/405
* style: add ruff updates by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/406
* style: pin ruff version to match template by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/408
* docs: readme glow-up by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/413
* build: update metadata by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/412
* chore: update license by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/411
* cicd: test on 3.12 by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/410
* cicd: require priority label on PRs by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/409
* chore: remove unused files by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/407
* fix: handle multiple CHEBI IDs on a row by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/416
* fix: prohibit xrefs from hemonc combo therapies by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/419
* fix: handle label and order by biologic suffix in merge groups by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/418
* feat: add progress bars/indicators to CLI ETL processes by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/422


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/0.5.0-dev3...0.5.0-dev4

0.5.0dev3

What's Changed
* docs: fix env var name for harvard dataverse api key by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/400
* docs: fix click option for sources to update by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/402
* fix: handle brand name lookup KeyError by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/404


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/0.5.0-dev2...0.5.0-dev3

0.5.0dev2

What's Changed
* perf: improve disease caching by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/391
* chore: fix up logging by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/390
* feat!: refine schemas by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/392
* feat: sort everything by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/393
* feat!: remove search result formatting option by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/394
* feat: set silent to False in CLI by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/398
* docs: update hemonc instructions in readme by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/397


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/0.5.0-dev1...0.5.0-dev2

0.5.0dev1

What's Changed
* docs: add paper citation by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/382
* fix: handle hemonc deprecated concept by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/384
* test: suppress noisy boto logs by default by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/386
* feat: implement latest data updates by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/385
* style: fix ruff settings by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/388
* feat!: use wags-tails for data management by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/389
* feat!: use abstract interface for DB by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/378


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/0.5.0-dev0...0.5.0-dev1

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