Vesical

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Our attempts to remove DuanDriver error messages thrown by MagmaSat ended up causing other things to break. This update removes DuanDriver "fixes". Expect to see more DuanDriver print messages when running MagmaSat if you got used to them not being there!

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This fixes the bug outlined in issue https://github.com/kaylai/VESIcal/issues/188, or rather provides a workaround for the bug in thermoengine that was causing it. Also fixed some flake8 complaints, and made some of the unit tests more robust to machine error and random thermoengine errors (see issue https://github.com/kaylai/VESIcal/issues/197). The testing routine passes on the ENKI server.

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Fixed bug in calculate_degassing_path() where the default final_pressure() value was set to 100 bars instead of 1 bar. Added code to silence unhelpful "Duan Driver" warning messages from thermoengine. Made significant updates to the unittest testing routines.

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Fixed a bug where a cation concentration was not returned for a Sample composition given in terms of oxides and vice versa.

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Made a minor adjustment to how pandas dataframes are handled that makes VESIcal work with Pandas 2.0. VESIcal will continue to work with Pandas 1.

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Fixed a bug where different models would return different data types. Any float is now returned as np.float rather than python's native float. Also removed some (but not all, unfortunately) unnecessary MagmaSat warnings.