* rename plotting options setting x- and y-limits to xlim and ylim
* parallel processing for stretching, reference trace must be used (--reftr)
* allow full stack with '' or 'all' (e.g. for creating a refence trace)
* parallel processing for full stack
* store correlations and sim_mat as half precission float16 by default
* fix various small bugs
* move some functions to new io module