Brainglobe-atlasapi

What's Changed
* minor bug fix utils.atlas_repr_from_name by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/520
* minor bug fix utils.retrieve_over_http by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/521
* Add Cuttlebase cuttlefish atlas by kjungwoo5 in https://github.com/brainglobe/brainglobe-atlasapi/pull/338
* minor bug fix bg_atlas.__repr__ by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/523
* Improve coverage for `bg_atlas.py` by mxochicale in https://github.com/brainglobe/brainglobe-atlasapi/pull/517
* Add blackcap atlas to readme by adamltyson in https://github.com/brainglobe/brainglobe-atlasapi/pull/527
* add test_str by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/526
* Increase utils test coverage by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/518
* Increase atlas name validation stringency by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/529
* Increase update_atlases test coverage by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/531
* Validate metadata by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/530
* Increase cli test coverage by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/533
* Improve coverage list_atlases by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/532
* [ENH] Fix internet connection check for global accessibility by samadpls in https://github.com/brainglobe/brainglobe-atlasapi/pull/536

New Contributors
* mxochicale made their first contribution in https://github.com/brainglobe/brainglobe-atlasapi/pull/517
* samadpls made their first contribution in https://github.com/brainglobe/brainglobe-atlasapi/pull/536

**Full Changelog**: https://github.com/brainglobe/brainglobe-atlasapi/compare/v2.2.0...v2.2.1

What's Changed
* Remove rich tracebacks by adamltyson in https://github.com/brainglobe/brainglobe-atlasapi/pull/502
* Remove main script by adamltyson in https://github.com/brainglobe/brainglobe-atlasapi/pull/504
* Remove inspect_meshes_folder function by adamltyson in https://github.com/brainglobe/brainglobe-atlasapi/pull/505
* Standardise text formatting by adamltyson in https://github.com/brainglobe/brainglobe-atlasapi/pull/507
* new atlas file added - for cat by HenryCrosswell in https://github.com/brainglobe/brainglobe-atlasapi/pull/403
* Update Python versions to adhere to SPEC 0 and remove Intel testing on macOS by adamltyson in https://github.com/brainglobe/brainglobe-atlasapi/pull/509
* add cat to readme table by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/508
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/brainglobe-atlasapi/pull/513
* update setuptools dependency by stellaprins in https://github.com/brainglobe/brainglobe-atlasapi/pull/516
* Add fn_update as an optional argument by kira1228 in https://github.com/brainglobe/brainglobe-atlasapi/pull/519

New Contributors
* HenryCrosswell made their first contribution in https://github.com/brainglobe/brainglobe-atlasapi/pull/403
* stellaprins made their first contribution in https://github.com/brainglobe/brainglobe-atlasapi/pull/516
* kira1228 made their first contribution in https://github.com/brainglobe/brainglobe-atlasapi/pull/519

**Full Changelog**: https://github.com/brainglobe/brainglobe-atlasapi/compare/v2.1.0...v2.2.0

What's Changed
* symmetrise mouselemur annotations by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/455
* Documents `hemispheres` behaviour for odd size templates by IgorTatarnikov in https://github.com/brainglobe/brainglobe-atlasapi/pull/457
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/brainglobe-atlasapi/pull/460
* update all script names to match api names by PolarBean in https://github.com/brainglobe/brainglobe-atlasapi/pull/462
* correct version typo by PolarBean in https://github.com/brainglobe/brainglobe-atlasapi/pull/493
* Australian mouse brain by PolarBean in https://github.com/brainglobe/brainglobe-atlasapi/pull/409
* Ignore atlas packaging scripts in test coverage by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/494
* codecov-badge-to-main by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/495
* Add additional atlas validation functions. by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/453
* second version of perens lsfm atlas by PolarBean in https://github.com/brainglobe/brainglobe-atlasapi/pull/458
* Table cleanup by PolarBean in https://github.com/brainglobe/brainglobe-atlasapi/pull/496
* Integrating atlas validation in wrapup.py by viktorpm in https://github.com/brainglobe/brainglobe-atlasapi/pull/445
* Adds fixture to download atlases for test_validation.py by IgorTatarnikov in https://github.com/brainglobe/brainglobe-atlasapi/pull/498
* Adds fixture to mock home for local testing by IgorTatarnikov in https://github.com/brainglobe/brainglobe-atlasapi/pull/499
* add support for custom offline atlases by carlocastoldi in https://github.com/brainglobe/brainglobe-atlasapi/pull/497


**Full Changelog**: https://github.com/brainglobe/brainglobe-atlasapi/compare/v2.0.13...v2.1.0

What's Changed
* added nadkarni_mri_mouselemur by PolarBean in https://github.com/brainglobe/brainglobe-atlasapi/pull/411
* add mouse lemur to docs by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/450
* update packaging script for new blackcap atlas name by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/452
* fix hemispheres being cut slightly off-centred by carlocastoldi in https://github.com/brainglobe/brainglobe-atlasapi/pull/454
* Use pypa/gh-action-pypi-publish stable release v1 by lochhh in https://github.com/brainglobe/brainglobe-atlasapi/pull/456

New Contributors
* lochhh made their first contribution in https://github.com/brainglobe/brainglobe-atlasapi/pull/456

**Full Changelog**: https://github.com/brainglobe/brainglobe-atlasapi/compare/v2.0.12...v2.0.13

What's Changed
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/brainglobe-atlasapi/pull/436
* Hemisphere improvements to axolotl atlas by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/438
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/brainglobe-atlasapi/pull/443
* first draft of symmetrical 25um blackcap atlas by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/314
* Add all Kim's DevCCFv1 atlases by carlocastoldi in https://github.com/brainglobe/brainglobe-atlasapi/pull/441
* Perens stereotaxic mri by PolarBean in https://github.com/brainglobe/brainglobe-atlasapi/pull/370
* document kim dev atlases in readme by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/444
* make kim dev atlas names lowercase by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/446
* Make atlas API more robust offline by alessandrofelder in https://github.com/brainglobe/brainglobe-atlasapi/pull/448
* Replace NIU upload action with separate actions by IgorTatarnikov in https://github.com/brainglobe/brainglobe-atlasapi/pull/449

New Contributors
* carlocastoldi made their first contribution in https://github.com/brainglobe/brainglobe-atlasapi/pull/441

**Full Changelog**: https://github.com/brainglobe/brainglobe-atlasapi/compare/v2.0.11...v2.0.12

What's Changed
* Add api name of atlases to readme by PolarBean in https://github.com/brainglobe/brainglobe-atlasapi/pull/422
* Add Prairie Vole atlas to list by adamltyson in https://github.com/brainglobe/brainglobe-atlasapi/pull/420
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/brainglobe-atlasapi/pull/424
* Standardising atlas file downloading by viktorpm in https://github.com/brainglobe/brainglobe-atlasapi/pull/351
* Notify slack on scheduled test failure by IgorTatarnikov in https://github.com/brainglobe/brainglobe-atlasapi/pull/427
* Fix typo in atlas list by adamltyson in https://github.com/brainglobe/brainglobe-atlasapi/pull/431
* Fail gracefully if cache directory is read only by IgorTatarnikov in https://github.com/brainglobe/brainglobe-atlasapi/pull/430
* Add extra check for response code fetching last_versions by IgorTatarnikov in https://github.com/brainglobe/brainglobe-atlasapi/pull/432


**Full Changelog**: https://github.com/brainglobe/brainglobe-atlasapi/compare/v2.0.10...v2.0.11