Neurodamus

=============
**17 April 2024**

*Bug Fixes*
* [BBPBGLIB-1145] Write gids without offset in WholeCell LB complexity file (148)
* [BBPGBLIB-1147] Fixes crashes with KeyError when running sonataconf-sscx-O1 circuit on dry run (149)
* Hotfix to solve crashes when running on certain amount of ranks (141)

*Improvements*
* [BBPBGLIB-1057] Replace Report.hoc by report.py (145)
* [BBPGLIB-1148] Add support for gap junctions in dry run (151)
* Update online-lfp.rst (152)
* Update docker file with the new data location (153)
* Replay with SONATA spikes files (150)
* Clean up wheel contents. (144)
* [BBPBGLIB-1139] Missing exception logging on configuration errors (142)

=============
**12 Mar 2024**

*Bug Fixes*
* Fix fetching error in GH workflow triggered by tag

=============
**12 Mar 2024**

*New Features*
* [BBPBGLIB-1102] (Part two) Load memory balance from file (129)
* [BBPBGLIB-1102] Add memory load balance export based on dry run estimate (111)

*Bug Fixes*
* StrEnum not working with older python versions (125)
* Fix unit tests (119)

*Improvements*
* [BBPBGLIB-1125] GH forkflow for building a wheel (121)
* On --debug install a hook for NGV to show neuro-glial "spikes" (137)
* [BBPBGLIB-1132] Replace StimulusManager.hoc with the python classes (132)
* [BBPBGLIB-1134] Move ShowProgress.hoc to python (131)
* [BBPBGLIB-1135] Move CompartmentMapping to python (133)
* [BBPBGLIB-1133] Remove ElectrodeManager.hoc and LookupTableV2.mod (128)
* [BBPBGLIB-1121] Remove BlueConfig parser (127)
* Use actions/checkoutv4 to use Node 20 (126)
* [BBPBGLIB-1127] Remove SpikeWriter.mod and out.dat (123)
* [BBPBGLIB-1110] Error now raised when executeConfigure is returned with errors (120)
* Remove SynapseReader.mod and SynReaderNRN (122)
* [BBPBGLIB-1124] Remove hoc targets related code (118)
* [BBPBGLIB-1120] Remove node loaders for MVD3 and NCS (117)

=============
**31 Jan 2024**

*New Features*
* Deprecate BlueConfig part-1: Raise errors for BlueConfig configuration files (101)
* Read synapse parameters in a collective safe manner. (85)

*Bug Fixes*
* [BBPBGLIB-1115] Fix issue with summation reports and cell target in NEURON (114)
* [BBPBGLIB-1114] Apply offset to the gids before reading node file (113)

*Improvements*
* [BBPBGLIB-1111] Raise a proper error when missing "--configFile=" (115)
* Remove dependency on mvdtool (112)
* Transform setup.py to pyproject.toml (110)

==============
**22 Dec 2023**

*New Features*
* Fast & lightweight dry run (91)
* Implement chunking mechanism for loading synapses in dryrun mode (88)
*Bug Fixes*
* CoreConfig: write_report_count() should always create a new report.conf (107)
* Fix netstim_inhpoisson.mod for CoreNEURON direct mode (94)
* Fix memory usage reporting on MacOS (105)
* Fix call to `trim_memory` on non-GNU C libraries (106)
* Fix unit test: new morphology test file to fulfil MorphIO change (104)
* [BBPBGLIB-1027] Fix: Load Balance with multi-populations (92)
* CI fix for `python setup.py egg_info` error (95)
* Build recipe: remove shallow clone to meet the version requirement of latest setuptools (90)
* Fix bug with duplicate count of synapses (87)
* Fix docs (84)
*Improvements*
* [BBPBGLIB-1093] Move scientific tests from blueconfigs (103)
* Update documentation for new synapse estimate algorithm (99)
* Modernize the setup infractructure slightly. (98)
* [BBPBGLIB-1092] Add unit tests for CLI options (86)
* [BBPBGLIB-1097] Reorganization of unit/integration tests (83)
* Update build_neurodamus.sh with `--only-neuron` (89)

==============
**17 Nov 2023**

*Bug Fixes*
* Use default dt value of NEURON in WholeCell load balancing (81)
* Fix conversion from sonata parameter to neurodamus internal key : amp_cv -> AmpCV (79)
*Improvements*
* CI and container improvements
* Protect numpy.concatenate empty tuple in get_local_gids (53)
* [BBPP134-1022] Handling exceptions from NEURON during emodel loading (80)