Spectrum-io

Changes

🚀 Features

* Feature/dlib support (99) picciama
* Feature/xl search engine (91) mostafakalhor

🐛 Bug Fixes

* Fix/sage read tmt and decoys (98) picciama
* alphatims RT in minutes instead of seconds (90) arne-vdb

:package: Dependencies

* [DEPENDABOT]: Bump actions/checkout from 2 to 4 (94) dependabot
* [DEPENDABOT]: Bump pypa/gh-action-pypi-publish from 1.6.4 to 1.8.14 (92) dependabot
* [DEPENDABOT]: Bump actions/cache from 3.2.4 to 4.0.2 (93) dependabot

Changes

🚀 Features

* Added functions to read the timsTOF raw .d folder. (76) adamscharlotte

Changes

* Chore/writer optimization (83) picciama

🐛 Bug Fixes
* fixed reading instrumentConfiguration when converting Raw to mzML using MSConvert

🚀 Features

* Feature/generic model support (80) picciama

🚀 Features

* Feature/sage (77) karimwh
* Feature/msfragger mods tmt (78) picciama

🐛 Bug Fixes

* fixed instrumentConfigurationRef missing (75) picciama

Hotfix

* does not fail on reading mzml if mass analyzer accession without mapping to default mass tolerance is present