Aicsimageio

Special Note
This is the last version that will support Python3.8

What's Changed
* Revert to pre-2023.3.15 tifffile to avoid mm_stack issue by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/529
* Adjust pydantic import by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/535
* Feature/nd2reader-xarray-ome-metadata by yichechang in https://github.com/AllenCellModeling/aicsimageio/pull/533
* Adjust bfio & fsspec versions to avoid bugs by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/537

New Contributors
* yichechang made their first contribution in https://github.com/AllenCellModeling/aicsimageio/pull/533

**Full Changelog**: https://github.com/AllenCellModeling/aicsimageio/compare/v4.12.1...v4.13.0

What's Changed
* Feature/ome_metadata-for-nd2 by tlambert03 in https://github.com/AllenCellModeling/aicsimageio/pull/521
* DependencyFix/Upgrade ome-types to 0.3.4 by Armavica in https://github.com/AllenCellModeling/aicsimageio/pull/522

New Contributors
* Armavica made their first contribution in https://github.com/AllenCellModeling/aicsimageio/pull/522

**Full Changelog**: https://github.com/AllenCellModeling/aicsimageio/compare/v4.12.0...v4.12.1

What's Changed
* Admin: Update deploy process by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/494
* Feature/sldy reader by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/496
* OmeZarrReader by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/493
* Admin/OmeZarrReader redundant test by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/507
* OmeZarrReader physical_pixel_sizes support by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/509
* Admin/OmeZarrReader variable dimension unit tests by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/510
* Guess dims for missing field 'axes' by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/514
* Ignore missing Position dimension by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/498
* Feature/OmeZarr Chunk Dims by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/519
* Limit numpy and dask by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/527


**Full Changelog**: https://github.com/AllenCellModeling/aicsimageio/compare/v4.11.0...v4.12.0

What's Changed
* Extract S dim from OME data by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/483
* admin/support-py311 by evamaxfield in https://github.com/AllenCellModeling/aicsimageio/pull/446
* Bugfix/mosaic lif merge error by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/480
* Bugfix/slow tile retrieval by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/486
* store frame metadata when reading a specific scene by joshua-gould in https://github.com/AllenCellModeling/aicsimageio/pull/492
* Adjusting tiffile versioning by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/487

New Contributors
* joshua-gould made their first contribution in https://github.com/AllenCellModeling/aicsimageio/pull/492

**Full Changelog**: https://github.com/AllenCellModeling/aicsimageio/compare/v4.10.0...v4.11.0

What's Changed
* fix/fix_future_warnings by JasonYu1 in https://github.com/AllenCellModeling/aicsimageio/pull/453
* More descriptive scene index error message. by pgarrison in https://github.com/AllenCellModeling/aicsimageio/pull/458
* Fix/build fix ometypes validation by toloudis in https://github.com/AllenCellModeling/aicsimageio/pull/461
* feature/zarrwriter by toloudis in https://github.com/AllenCellModeling/aicsimageio/pull/381
* Bugfix/Docs-README-Mention-mvn/maven-requirement-for-bioformats_jar by psobolewskiPhD in https://github.com/AllenCellModeling/aicsimageio/pull/463
* Quality of Life: Make pip install platform independent by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/466
* Bugfix: Fix tests not asserting error expected by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/464
* Bugfix: Restrict tifffile version for now by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/472
* Bugfix: Upgrade minimum fsspec version by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/473
* Bugfix: unclear warning for missing 'bfio' install. by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/471
* feature/add-physical-pixel-size-to-tiff-reader by tlambert03 in https://github.com/AllenCellModeling/aicsimageio/pull/456
* feature/github-action-stale by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/474
* bugfix: removing 2.11.0 threshold by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/470
* Bugfix/empty scene name by BrianWhitneyAI in https://github.com/AllenCellModeling/aicsimageio/pull/477
* try to use optimized codepath through ome-types by toloudis in https://github.com/AllenCellModeling/aicsimageio/pull/478
* Restrict xarray version to support py3.8 by SeanLeRoy in https://github.com/AllenCellModeling/aicsimageio/pull/481

New Contributors
* JasonYu1 made their first contribution in https://github.com/AllenCellModeling/aicsimageio/pull/453
* pgarrison made their first contribution in https://github.com/AllenCellModeling/aicsimageio/pull/458

**Full Changelog**: https://github.com/AllenCellModeling/aicsimageio/compare/v4.9.4...v4.10.0

What's Changed
* bugfix/Fix `UnboundLocalError` in TiffGlobReader by ianhi in https://github.com/AllenCellModeling/aicsimageio/pull/449


**Full Changelog**: https://github.com/AllenCellModeling/aicsimageio/compare/v4.9.3...v4.9.4