Almanack

Changes

- Improve notebook processing speed and avoid full repo clone for hook (d33bs via 415)

Changes

- Bump the python-packages group across 1 directory with 3 updates ([dependabot[bot]](https://github.com/apps/dependabot) via #408)
- Implement Jupyter Notebook Execution Order Checker (axiomcura via 348)
- Bump wheel from 0.42.0 to 0.46.2 ([dependabot[bot]](https://github.com/apps/dependabot) via #406)

Changes

- Remove DOI resolvable metric from checks (d33bs via 405)
- Bump the python-packages group across 1 directory with 6 updates ([dependabot[bot]](https://github.com/apps/dependabot) via #404)

Changes

- Add DOI request backoffs (d33bs via 403)
- Bump urllib3 from 2.6.0 to 2.6.3 ([dependabot[bot]](https://github.com/apps/dependabot) via #400)
- Remove entropy check from CI (d33bs via 392)

Changes

- Bump the python-packages group across 1 directory with 3 updates ([dependabot[bot]](https://github.com/apps/dependabot) via #396)
- Update PubMed seed-bank notebook and add batch processing capabilities to `almanack` (willdavidson05 via 359)
- Bump playwright from 1.56.0 to 1.57.0 in the python-packages group ([dependabot[bot]](https://github.com/apps/dependabot) via #394)
- Bump the python-packages group with 3 updates ([dependabot[bot]](https://github.com/apps/dependabot) via #391)
- Bump urllib3 from 2.5.0 to 2.6.0 ([dependabot[bot]](https://github.com/apps/dependabot) via #390)
- Bump the python-packages group with 6 updates ([dependabot[bot]](https://github.com/apps/dependabot) via #389)
- Bump actions/checkout from 5 to 6 ([dependabot[bot]](https://github.com/apps/dependabot) via #388)
- Bump js-yaml from 4.1.0 to 4.1.1 ([dependabot[bot]](https://github.com/apps/dependabot) via #387)
- Bump the python-packages group with 5 updates ([dependabot[bot]](https://github.com/apps/dependabot) via #386)

Changes

- Bump the python-packages group across 1 directory with 5 updates ([dependabot[bot]](https://github.com/apps/dependabot) via #385)
- Support contributing file in `.github/ `subdir (kelly-sovacool via 379)
- End Python 3.9 support (d33bs via 380)
- Add CODEOWNERS file for default review assignments (d33bs via 372)
- Bump charset-normalizer from 3.4.3 to 3.4.4 in the python-packages group ([dependabot[bot]](https://github.com/apps/dependabot) via #378)
- Bump the python-packages group with 3 updates ([dependabot[bot]](https://github.com/apps/dependabot) via #375)
- Fix PubMed repo analysis visualization (d33bs via 374)