Autonicer

Latest version: v1.3.0

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1.2.2

- Migrated sp.run("ls STUFF") commands to glob
- Limited get_caldb_ver() pulls to once per run of autonicer rather than once per OBSID passed in
- Added error handling for datasets lacking the required metadata
- Added unix like passthrough to `--inlist` so use cases like `--inlist *` will pass in all datasets for the current working dir

1.2.1

- Fixed vulnerability with CVE-2022-2341
- Fixed issue where --checkcal kills --inlist cmd

1.2.0

Not secure
- Added `--checkcal` CLI option to check if calibrations are up to date with an existing NICER OBSID dataset
- Added `--reprocess` CLI option to reprocess an existing NICER OBSID dataset with nicerl2
- Added `--bc` CLI option to toggle the barycenter correction setting with autonicer whether pulling and reducing or reprocessing
- Added `--compress` CLI option to toggle the compression of ufa .evt files again whether pulling and reducing or just reducing
- Added `--inlist` CLI option that accepts the path to a file in csv format with the column `Input` containing the paths to NICER OBSID datasets or mpu7_cl.evt files (This works great with the output log csv files)
- Changed compression from .tar.gz format to just .gz format (decompression of .tar.gz's supported to handle files compressed with pervious versions)
- Tested issues with Astropy v5.1, Astroquery, and HEASARC. Found no issues and supressed warnings.
- Significant additions to testing taking coverage >= 90%
- Resolved dependency vulnerability with CVE-2022-42969

1.1.3

Not secure
- Fixed bug with single OBSID not resolving. When querying HEASARC sometimes an extra space would be in the OBSID which lead to the resolving issues.

1.1.2

Not secure
- Error handling for duplicate obsid entries from the autoNICER prompt
- Error handling for src not resolving in HEASARC nicermastr
- Added `settings` command to display current settings
- Added `--src` flag that can be called from the command line to set the src with default settings (i.e. `$ autonicer --src=DESIRED-SRC`)

1.1.1

Not secure
- Error handling for the done command
- Error handling for OBSIDs that do not exist in the nicermastr query
- Error handling for OBSID entries that are too short
- Fixed new issue where autonicer runs pull_reduce after each command
- Enhanced testing of commands
- Removed pull_reduce call from the init and added it under the done command

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