Bids-validator

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1.11.0

What's Changed
* BEP029 Motion (validator) by sjeung in https://github.com/bids-standard/bids-validator/pull/1434
* [SCHEMA] Add a development script entrypoint with deno options by nellh in https://github.com/bids-standard/bids-validator/pull/1600
* feat(schema): Add build script for browser compatible builds by nellh in https://github.com/bids-standard/bids-validator/pull/1605
* [SCHEMA] Browser file API support by nellh in https://github.com/bids-standard/bids-validator/pull/1606
* Add cli option to specify schema url or file. by rwblair in https://github.com/bids-standard/bids-validator/pull/1602
* fix(schema): Fix regression in legacy nifti test when run with Deno by nellh in https://github.com/bids-standard/bids-validator/pull/1609
* deps(schema): Update to latest standard library deps by nellh in https://github.com/bids-standard/bids-validator/pull/1610
* Schema/web build fixes by nellh in https://github.com/bids-standard/bids-validator/pull/1612
* dep(schema): Update to latest build of Cliffy for table output by nellh in https://github.com/bids-standard/bids-validator/pull/1613
* feat(cli): Switch from Yargs -> Cliffy by nellh in https://github.com/bids-standard/bids-validator/pull/1615
* Add bids-examples test to schema based validator. by rwblair in https://github.com/bids-standard/bids-validator/pull/1611
* [SCHEMA] Logger functions for debug flag by nellh in https://github.com/bids-standard/bids-validator/pull/1618
* expression test test by rwblair in https://github.com/bids-standard/bids-validator/pull/1617
* Add deno tests to github actions by rwblair in https://github.com/bids-standard/bids-validator/pull/1616
* fix(schema): Remove extra ts-expect-error by nellh in https://github.com/bids-standard/bids-validator/pull/1619
* fix(schema): Handle logging tracebacks better and add test for examples by nellh in https://github.com/bids-standard/bids-validator/pull/1620
* fix(schema): Log errors when a NIfTI cannot be read by nellh in https://github.com/bids-standard/bids-validator/pull/1621
* [SCHEMA] Build fixes for OpenNeuro by nellh in https://github.com/bids-standard/bids-validator/pull/1623
* [FIX] orientation_component -> component by sappelhoff in https://github.com/bids-standard/bids-validator/pull/1629
* [ENH] add task entity for anat by Remi-Gau in https://github.com/bids-standard/bids-validator/pull/1578
* [ENH] add support for qMRI json in top dir by Remi-Gau in https://github.com/bids-standard/bids-validator/pull/1546
* chore(deps): bump bids-validator/spec from `00105ec` to `bfc1c2e` by dependabot in https://github.com/bids-standard/bids-validator/pull/1635
* [Fix] broken applyRules as discovered by bids examples test. by rwblair in https://github.com/bids-standard/bids-validator/pull/1622
* docs(schema): Bring the README up to date by nellh in https://github.com/bids-standard/bids-validator/pull/1638
* [SCHEMA] Disable --legacy flag by nellh in https://github.com/bids-standard/bids-validator/pull/1642

New Contributors
* sjeung made their first contribution in https://github.com/bids-standard/bids-validator/pull/1434

**Full Changelog**: https://github.com/bids-standard/bids-validator/compare/v1.10.0...v1.11.0

1.10.0

What's Changed
* Schema/expression language by rwblair in https://github.com/bids-standard/bids-validator/pull/1535
* chore(deps): bump parse-url from 7.0.2 to 8.1.0 by dependabot in https://github.com/bids-standard/bids-validator/pull/1548
* chore(deps): bump xmldom/xmldom from 0.7.5 to 0.7.6 by dependabot in https://github.com/bids-standard/bids-validator/pull/1550
* Bump shell-quote 1.7.2 ⤑ 1.7.4 by DimitriPapadopoulos in https://github.com/bids-standard/bids-validator/pull/1551
* Bump versioneer 0.20 → 0.26 by DimitriPapadopoulos in https://github.com/bids-standard/bids-validator/pull/1552
* chore(deps): bump docker/build-push-action from 3.1.1 to 3.2.0 by dependabot in https://github.com/bids-standard/bids-validator/pull/1556
* chore(deps): bump bids-validator/tests/data/bids-examples from `e84c122` to `dc620a2` by dependabot in https://github.com/bids-standard/bids-validator/pull/1553
* chore(deps): bump docker/metadata-action from 4.0.1 to 4.1.1 by dependabot in https://github.com/bids-standard/bids-validator/pull/1554
* chore(deps): bump bids-validator/spec from `23d9892` to `acd7fe4` by dependabot in https://github.com/bids-standard/bids-validator/pull/1555
* chore(deps): bump docker/login-action from 2.0.0 to 2.1.0 by dependabot in https://github.com/bids-standard/bids-validator/pull/1557
* CI: Cancel jobs if branch is updated by effigies in https://github.com/bids-standard/bids-validator/pull/1558
* ENH: Add physio/stim files to ASL and PET rules by effigies in https://github.com/bids-standard/bids-validator/pull/1560
* chore(deps): bump bids-validator/spec from `acd7fe4` to `ec7a5ad` by dependabot in https://github.com/bids-standard/bids-validator/pull/1563
* chore(deps): bump qs from 6.10.1 to 6.11.0 by dependabot in https://github.com/bids-standard/bids-validator/pull/1566
* chore(deps): bump minimatch from 3.0.4 to 3.0.5 by dependabot in https://github.com/bids-standard/bids-validator/pull/1567
* chore(deps): bump decode-uri-component from 0.2.0 to 0.2.2 by dependabot in https://github.com/bids-standard/bids-validator/pull/1568
* chore(deps): bump xmldom/xmldom from 0.7.6 to 0.7.9 by dependabot in https://github.com/bids-standard/bids-validator/pull/1569
* Adding conda recipe by sarthakpati in https://github.com/bids-standard/bids-validator/pull/1570
* ENH: Check for empty or whitespace-only dataset names by effigies in https://github.com/bids-standard/bids-validator/pull/1572
* chore(deps): bump bids-validator/tests/data/bids-examples from `dc620a2` to `7c3e673` by dependabot in https://github.com/bids-standard/bids-validator/pull/1575
* chore(deps): bump bids-validator/spec from `ec7a5ad` to `83e20a1` by dependabot in https://github.com/bids-standard/bids-validator/pull/1576
* chore(deps): bump json5 from 2.2.0 to 2.2.3 by dependabot in https://github.com/bids-standard/bids-validator/pull/1577
* FIX: Use intersection to find existing events.json files by effigies in https://github.com/bids-standard/bids-validator/pull/1574
* bump python version; 3.7 will be EOL in june by sappelhoff in https://github.com/bids-standard/bids-validator/pull/1584
* FIX: Update score library to resolve failing tests by effigies in https://github.com/bids-standard/bids-validator/pull/1591
* chore(deps): bump bids-validator/spec from `83e20a1` to `00105ec` by dependabot in https://github.com/bids-standard/bids-validator/pull/1593
* chore(deps): bump docker/build-push-action from 3.2.0 to 4.0.0 by dependabot in https://github.com/bids-standard/bids-validator/pull/1594
* chore(deps): bump bids-validator/tests/data/bids-examples from `7c3e673` to `96991dd` by dependabot in https://github.com/bids-standard/bids-validator/pull/1596
* chore(deps): bump docker/metadata-action from 4.1.1 to 4.3.0 by dependabot in https://github.com/bids-standard/bids-validator/pull/1595
* docs(schema): Add some explanation for how to reload the latest version of the specification JSON by nellh in https://github.com/bids-standard/bids-validator/pull/1592
* Schema/derivatives walk by rwblair in https://github.com/bids-standard/bids-validator/pull/1547
* FIX/FEAT: Use specific schema version by sebastientourbier in https://github.com/bids-standard/bids-validator/pull/1580
* chore(deps): bump http-cache-semantics from 4.1.0 to 4.1.1 by dependabot in https://github.com/bids-standard/bids-validator/pull/1599

New Contributors
* sarthakpati made their first contribution in https://github.com/bids-standard/bids-validator/pull/1570
* sebastientourbier made their first contribution in https://github.com/bids-standard/bids-validator/pull/1580

Thank y'all for your contributions, both PRs were solid additions to the validator.

**Full Changelog**: https://github.com/bids-standard/bids-validator/compare/v1.9.9...v1.10.0

1.9.9

What's Changed
* feat: Add support for readBytes on BIDSFileDeno by nellh in https://github.com/bids-standard/bids-validator/pull/1536
* [SCHEMA]: Add slice support for AdapterFile by nellh in https://github.com/bids-standard/bids-validator/pull/1539
* add PartialFourier to schema by sappelhoff in https://github.com/bids-standard/bids-validator/pull/1540
* add NIRS to blacklist modalities by sappelhoff in https://github.com/bids-standard/bids-validator/pull/1538
* update continous recordings to throw code 170 instead 133 by rwblair in https://github.com/bids-standard/bids-validator/pull/1542
* chore(deps): bump bids-validator/spec from `f476d43` to `23d9892` by dependabot in https://github.com/bids-standard/bids-validator/pull/1543


**Full Changelog**: https://github.com/bids-standard/bids-validator/compare/v1.9.8...v1.9.9

1.9.8

What's Changed

* Add NIRS support to BIDS Validator by rob-luke in https://github.com/bids-standard/bids-validator/pull/952
* Implementation and basic unit tests for HEDVersion with libraries by VisLab in https://github.com/bids-standard/bids-validator/pull/1496
* [ENH] add task metadata to pet json by Remi-Gau in https://github.com/bids-standard/bids-validator/pull/1512
* Update regexp for blood pet to require the recording entity by mnoergaard in https://github.com/bids-standard/bids-validator/pull/1500
* feat: Add schemaOnly flag to disable backwards compat validator by nellh in https://github.com/bids-standard/bids-validator/pull/1462
* try dependabot for submodule updates by sappelhoff in https://github.com/bids-standard/bids-validator/pull/1513
* [SCHEMA] add evalCheck by rwblair in https://github.com/bids-standard/bids-validator/pull/1452
* [SCHEMA] add entities to context and validate them. by rwblair in https://github.com/bids-standard/bids-validator/pull/1456
* [SCHEMA] Issues type cleanup by nellh in https://github.com/bids-standard/bids-validator/pull/1463
* [SCHEMA] Test type and permission fixes by nellh in https://github.com/bids-standard/bids-validator/pull/1473
* [SCHEMA] .bidsignore implementation for Deno by nellh in https://github.com/bids-standard/bids-validator/pull/1474
* [SCHEMA] Implement NOT_INCLUDED by nellh in https://github.com/bids-standard/bids-validator/pull/1475
* [SCHEMA] Add test for valid_headers and enable .bidsignore rule handling by nellh in https://github.com/bids-standard/bids-validator/pull/1476
* [SCHEMA] tests: Add integration tests for summary and empty_files using example datasets by nellh in https://github.com/bids-standard/bids-validator/pull/1480
* [SCHEMA] feat: Add .text() method to BIDSFileDeno for quickly accessing full text by nellh in https://github.com/bids-standard/bids-validator/pull/1482
* Add summary generation to schema-prototype by rwblair in https://github.com/bids-standard/bids-validator/pull/1481
* [BOT] Updating git submodules by github-actions in https://github.com/bids-standard/bids-validator/pull/1492
* [BOT] Updating git submodules by github-actions in https://github.com/bids-standard/bids-validator/pull/1494
* [SCHEMA] tests: Validate BOM handling behavior for UTF-8 JSON files by nellh in https://github.com/bids-standard/bids-validator/pull/1498
* [SCHEMA] Build Deno validator bundle for web apps by nellh in https://github.com/bids-standard/bids-validator/pull/1502
* [SCHEMA] Expand on getting started with the Deno validator. by nellh in https://github.com/bids-standard/bids-validator/pull/1501
* [WIP] Function to load json sidecar and functions to evaluate different rule types. by rwblair in https://github.com/bids-standard/bids-validator/pull/1487
* [SCHEMA] tests: Improve logging for tests to show the actual failing Issue by nellh in https://github.com/bids-standard/bids-validator/pull/1503
* [SCHEMA] Implement EMPTY_FILE and reorganize check calls as array by nellh in https://github.com/bids-standard/bids-validator/pull/1504
* add leading slash to empty_file check path by rwblair in https://github.com/bids-standard/bids-validator/pull/1505
* [SCHEMA] Human readable output support by nellh in https://github.com/bids-standard/bids-validator/pull/1506
* [SCHEMA] docs: Add more details for setting up the Deno validator for testing/dev by nellh in https://github.com/bids-standard/bids-validator/pull/1508
* [SCHEMA] Minor fixes for merging by nellh in https://github.com/bids-standard/bids-validator/pull/1509
* Schema based validation by nellh in https://github.com/bids-standard/bids-validator/pull/1455
* [SCHEMA] Load schema using dynamic/static ES imports by nellh in https://github.com/bids-standard/bids-validator/pull/1511
* chore(deps): bump actions/setup-go from 1 to 3 by dependabot in https://github.com/bids-standard/bids-validator/pull/1516
* chore(deps): bump bids-validator/tests/data/bids-examples from `2524491` to `ba2d5e3` by dependabot in https://github.com/bids-standard/bids-validator/pull/1514
* chore(deps): bump bids-validator/spec from `7f5f042` to `8106ee8` by dependabot in https://github.com/bids-standard/bids-validator/pull/1515
* chore(deps): bump actions/checkout from 2 to 3 by dependabot in https://github.com/bids-standard/bids-validator/pull/1517
* chore(deps): bump docker/metadata-action from 3.4.1 to 4.0.1 by dependabot in https://github.com/bids-standard/bids-validator/pull/1518
* chore(deps): bump docker/login-action from 1.10.0 to 2.0.0 by dependabot in https://github.com/bids-standard/bids-validator/pull/1519
* chore(deps): bump actions/setup-node from 2 to 3 by dependabot in https://github.com/bids-standard/bids-validator/pull/1520
* chore(deps): bump docker/build-push-action from 2.6.1 to 3.1.1 by dependabot in https://github.com/bids-standard/bids-validator/pull/1521
* chore(deps): bump crazy-max/ghaction-chocolatey from 1 to 2 by dependabot in https://github.com/bids-standard/bids-validator/pull/1522
* chore(deps): bump peter-evans/create-pull-request from 3 to 4 by dependabot in https://github.com/bids-standard/bids-validator/pull/1523
* chore(deps): bump bids-validator/spec from `8106ee8` to `da68bd9` by dependabot in https://github.com/bids-standard/bids-validator/pull/1525
* chore(deps): bump bids-validator/tests/data/bids-examples from `053dd77` to `e84c122` by dependabot in https://github.com/bids-standard/bids-validator/pull/1527
* chore(deps): bump bids-validator/spec from `da68bd9` to `f476d43` by dependabot in https://github.com/bids-standard/bids-validator/pull/1526

New Contributors
* rob-luke made their first contribution in https://github.com/bids-standard/bids-validator/pull/952

**Full Changelog**: https://github.com/bids-standard/bids-validator/compare/v1.9.7...v1.9.8

1.9.7

What's Changed
* Relax NIfTI IntendedFor check when BIDS-URIs are used by sappelhoff in https://github.com/bids-standard/bids-validator/pull/1409
* [BOT] Updating git submodules by github-actions in https://github.com/bids-standard/bids-validator/pull/1491
* Add ordering error for eeg channels.tsv by rwblair in https://github.com/bids-standard/bids-validator/pull/1441
* Add tests against tsv headers to check for duplicate, empty, and 'n/a' values. by rwblair in https://github.com/bids-standard/bids-validator/pull/1488


**Full Changelog**: https://github.com/bids-standard/bids-validator/compare/v1.9.6...v1.9.7

1.9.6

What's Changed
* FIX: Escape dots in file extension-matching regexes by sappelhoff in https://github.com/bids-standard/bids-validator/pull/1489
* [ENH] Microscopy: Add validation of JSON for photo files by mariehbourget in https://github.com/bids-standard/bids-validator/pull/1415


**Full Changelog**: https://github.com/bids-standard/bids-validator/compare/v1.9.5...v1.9.6

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